Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Namu_0321

Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. DNA binding Source: UniProtKB-KW
  2. sequence-specific DNA binding transcription factor activity Source: InterPro

GO - Biological processi

  1. transcription, DNA-templated Source: UniProtKB-KW
Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-325-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Namu_0321Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeNakamurellaceaeNakamurella
ProteomesiUP000002218 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_0321.

Structurei

3D structure databases

ProteinModelPortaliC8XK68.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8XK68-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLAADPAPAR PRRAEVLAAL SLALDLGLGQ PMEHMLRAAV IATRMADRIG
60 70 80 90 100
MDATERGVVY YAELVSWIGC QADSPELSAL FADEIAFRAG TFPIDLRGRN
110 120 130 140 150
RARFLLGQAG HGRPPLAGGR ARLRLLADGR RRMHELLESH YASAGALADR
160 170 180 190 200
LGLGAGVRDA IHHTFERWDG TGLPRGIGGP AIPIAMRIVH VADVIEVQLR
210 220 230 240 250
AAGPEAAVQL ARRRSGTQFD PQVVAVLTGA ADEIFAGLDQ QDVWPLALSQ
260 270 280 290 300
APDPRLALSD PEVDALLIAI GDFVDVKSPR RQGHSRRVGA LAARAGQSRG
310 320 330 340 350
LPETTVHALR RAGWVHDLGR LGVPGALWDR SGPLSSADRE RIRLYPYFTQ
360 370 380 390 400
RILGRVGGLA EVAEIAGAHR ERLDGSGFPR GVDGSSLSVP ARLLAAAARL
410 420 430 440 450
QSLTEERLDR PAVGLAQAVR TLEREAAAGA LDAQAVAAVA DAAGQPQPRR
460 470 480 490 500
RARATGLTAR EEQVLALAAV GRSSRQIAAE LTISEKTARN HLEHIYTKTG
510 520
VSNRAGASLF AVQHGIVRAG PPTG
Length:524
Mass (Da):55,668
Last modified:November 2, 2009 - v1
Checksum:i2393C11ADE05CF72
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76751.1.
RefSeqiWP_012814226.1. NC_013235.1.
YP_003199740.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV76751; ACV76751; Namu_0321.
KEGGinml:Namu_0321.
PATRICi22658150. VBINakMul62011_0329.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76751.1.
RefSeqiWP_012814226.1. NC_013235.1.
YP_003199740.1. NC_013235.1.

3D structure databases

ProteinModelPortaliC8XK68.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479431.Namu_0321.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV76751; ACV76751; Namu_0321.
KEGGinml:Namu_0321.
PATRICi22658150. VBINakMul62011_0329.

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiTRCQRGA.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-325-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104Imported.

Entry informationi

Entry nameiC8XK68_NAKMY
AccessioniPrimary (citable) accession number: C8XK68
Entry historyi
Integrated into UniProtKB/TrEMBL: November 2, 2009
Last sequence update: November 2, 2009
Last modified: March 31, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.