C8XK68 (C8XK68_NAKMY) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LuxR family EMBL ACV76751.1

Gene names

Ordered Locus Names:

Namu_0321 EMBL ACV76751.1

Organism

Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita) [Complete proteome] [HAMAP] EMBL ACV76751.1

Taxonomic identifier

479431 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Frankineae › Nakamurellaceae › Nakamurella › Nakamurella multipartita

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707
Ligand	DNA-binding SAAS SAAS000792 RuleBase RU000707
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8XK68 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: 2393C11ADE05CF72	FASTA	524	55,668
	10 20 30 40 50 60 MLAADPAPAR PRRAEVLAAL SLALDLGLGQ PMEHMLRAAV IATRMADRIG MDATERGVVY 70 80 90 100 110 120 YAELVSWIGC QADSPELSAL FADEIAFRAG TFPIDLRGRN RARFLLGQAG HGRPPLAGGR 130 140 150 160 170 180 ARLRLLADGR RRMHELLESH YASAGALADR LGLGAGVRDA IHHTFERWDG TGLPRGIGGP 190 200 210 220 230 240 AIPIAMRIVH VADVIEVQLR AAGPEAAVQL ARRRSGTQFD PQVVAVLTGA ADEIFAGLDQ 250 260 270 280 290 300 QDVWPLALSQ APDPRLALSD PEVDALLIAI GDFVDVKSPR RQGHSRRVGA LAARAGQSRG 310 320 330 340 350 360 LPETTVHALR RAGWVHDLGR LGVPGALWDR SGPLSSADRE RIRLYPYFTQ RILGRVGGLA 370 380 390 400 410 420 EVAEIAGAHR ERLDGSGFPR GVDGSSLSVP ARLLAAAARL QSLTEERLDR PAVGLAQAVR 430 440 450 460 470 480 TLEREAAAGA LDAQAVAAVA DAAGQPQPRR RARATGLTAR EEQVLALAAV GRSSRQIAAE 490 500 510 520 LTISEKTARN HLEHIYTKTG VSNRAGASLF AVQHGIVRAG PPTG

References

[1]

"The complete genome of Nakamurella multipartita DSM 44233." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Sims D., Meincke L., Brettin T., Detter J.C., Han C. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001737 Genomic DNA. Translation: ACV76751.1.
RefSeq	YP_003199740.1. NC_013235.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	479431.Namu_0321.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV76751; ACV76751; Namu_0321.
GeneID	8445902.
KEGG	nml:Namu_0321.
PATRIC	22658150. VBINakMul62011_0329.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2771.
HOGENOM	HOG000268981.
OMA	DLGCSSN.
ProtClustDB	CLSK688397.
Enzyme and pathway databases
BioCyc	NMUL479431:GHQL-325-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 1.10.3210.10. 1 hit.
InterPro	IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8XK68_NAKMY

Accession

Primary (citable) accession number: C8XK68

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 29, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)