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C8XK68 (C8XK68_NAKMY) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length524 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Sequences

Sequence LengthMass (Da)Tools
C8XK68 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 2393C11ADE05CF72

FASTA52455,668
        10         20         30         40         50         60 
MLAADPAPAR PRRAEVLAAL SLALDLGLGQ PMEHMLRAAV IATRMADRIG MDATERGVVY 

        70         80         90        100        110        120 
YAELVSWIGC QADSPELSAL FADEIAFRAG TFPIDLRGRN RARFLLGQAG HGRPPLAGGR 

       130        140        150        160        170        180 
ARLRLLADGR RRMHELLESH YASAGALADR LGLGAGVRDA IHHTFERWDG TGLPRGIGGP 

       190        200        210        220        230        240 
AIPIAMRIVH VADVIEVQLR AAGPEAAVQL ARRRSGTQFD PQVVAVLTGA ADEIFAGLDQ 

       250        260        270        280        290        300 
QDVWPLALSQ APDPRLALSD PEVDALLIAI GDFVDVKSPR RQGHSRRVGA LAARAGQSRG 

       310        320        330        340        350        360 
LPETTVHALR RAGWVHDLGR LGVPGALWDR SGPLSSADRE RIRLYPYFTQ RILGRVGGLA 

       370        380        390        400        410        420 
EVAEIAGAHR ERLDGSGFPR GVDGSSLSVP ARLLAAAARL QSLTEERLDR PAVGLAQAVR 

       430        440        450        460        470        480 
TLEREAAAGA LDAQAVAAVA DAAGQPQPRR RARATGLTAR EEQVLALAAV GRSSRQIAAE 

       490        500        510        520 
LTISEKTARN HLEHIYTKTG VSNRAGASLF AVQHGIVRAG PPTG 

« Hide

References

[1]"The complete genome of Nakamurella multipartita DSM 44233."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Sims D., Meincke L., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001737 Genomic DNA. Translation: ACV76751.1.
RefSeqYP_003199740.1. NC_013235.1.

3D structure databases

ProteinModelPortalC8XK68.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING479431.Namu_0321.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV76751; ACV76751; Namu_0321.
GeneID8445902.
KEGGnml:Namu_0321.
PATRIC22658150. VBINakMul62011_0329.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG2771.
HOGENOMHOG000268981.
OMAFANARGH.
OrthoDBEOG6G4VQG.

Enzyme and pathway databases

BioCycNMUL479431:GHQL-325-MONOMER.

Family and domain databases

Gene3D1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamPF00196. GerE. 1 hit.
[Graphical view]
PRINTSPR00038. HTHLUXR.
SMARTSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMSSF46894. SSF46894. 1 hit.
PROSITEPS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8XK68_NAKMY
AccessionPrimary (citable) accession number: C8XK68
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 14, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)