Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C8XIX5

- C8XIX5_NAKMY

UniProt

C8XIX5 - C8XIX5_NAKMY

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Namu_0128

Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-131-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Namu_0128Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeNakamurellaceaeNakamurella
ProteomesiUP000002218: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_0128.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8XIX5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAADSATVEV DGHRIALTHL RKVLYPASGT TKSEVIAYFA EVAHAMIPHL
60 70 80 90 100
ADRPVTRKRW PDGVTTAPFF HKDLPKGTPS WVPRRTIRHS DGPKDYPLVD
110 120 130 140 150
SPATLAWLGQ IAALELHVPQ WTFGSAAASV AGGDGEITEA VFDAVHPNRL
160 170 180 190 200
VFDLDPGPGV ELVDCAHVAR AVRERMGGAA LVPVTSGSKG IHLYAWLDGS
210 220 230 240 250
LTSDDASAYA REIAEAIEQD MPDLVVSRMA KSLRRGKVFI DWSQNNGSKT
260 270 280 290 300
TIAPYSLRGR EHPTVAAPRT WEELADPELR HLEYTEVLEL LAAAPDPMQG
310 320 330 340 350
LEDGDNDGAE TRGGSRRRGR GPDTKLDTYR SMRSADKTPE PVPEPGLLPQ
360 370 380 390 400
GDDDTFVIQE HHARRLHYDF RLERDGVLVS WAVPKGVPES TGRNHLAVHT
410 420 430 440 450
EDHPMDYADF AGEIPHGEYG GGTVSIWDRG TYATEKWRED EVIIVLHGGK
460 470 480 490 500
ARGRYALIRT GGKNWLMHRM KDQSPQPKQY DDHRPATPTA PVTARPAPAR
510 520 530 540 550
STRPEPPKDL RPMLATAGSV EDVADERRWR FEGKWDGIRA IATVGPSGLT
560 570 580 590 600
LRSRLGNDVT PTYPELAVLA ELLDGHSAVL DGEIVALQDG RTSFHEMQKR
610 620 630 640 650
MNVQRARDVA RVMRDVPVQF WIFDVLNLDG ISLLDKRYDD RRRILEALPL
660 670 680 690 700
TGGVCLVPPQ LAGPARDALR GSADRQWEGI VAKLGDSTYQ PGRRSHSWLK
710 720 730 740 750
IKNFLDLEVV VVGWSPGTGR REGTVGALLL AVPDGAGGLR YAGKVGTGFT
760 770 780 790 800
DAILDQLMQA LAPLRADRSA VADTIPRADA AGAIWVRPEL VGEVKYGQWT
810 820 830
PERRLRATSW RGLRPDKTVA DLIAGSAPPP S
Length:831
Mass (Da):91,090
Last modified:November 3, 2009 - v1
Checksum:i1D4EC185FB362C25
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76562.1.
RefSeqiWP_012814037.1. NC_013235.1.
YP_003199551.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV76562; ACV76562; Namu_0128.
GeneIDi8445708.
KEGGinml:Namu_0128.
PATRICi22657752. VBINakMul62011_0131.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76562.1 .
RefSeqi WP_012814037.1. NC_013235.1.
YP_003199551.1. NC_013235.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 479431.Namu_0128.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACV76562 ; ACV76562 ; Namu_0128 .
GeneIDi 8445708.
KEGGi nml:Namu_0128.
PATRICi 22657752. VBINakMul62011_0131.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci NMUL479431:GHQL-131-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104Imported.

Entry informationi

Entry nameiC8XIX5_NAKMY
AccessioniPrimary (citable) accession number: C8XIX5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: October 1, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3