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C8XIX5

- C8XIX5_NAKMY

UniProt

C8XIX5 - C8XIX5_NAKMY

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Protein
Submitted name: DNA polymerase LigD, polymerase domain protein
Gene
Namu_0128
Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro
  3. DNA primase activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-131-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Namu_0128Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeNakamurellaceaeNakamurella
ProteomesiUP000002218: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_0128.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000222509.
KOiK01971.
OMAiSKGIHLY.
OrthoDBiEOG661H49.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8XIX5-1 [UniParc]FASTAAdd to Basket

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MAADSATVEV DGHRIALTHL RKVLYPASGT TKSEVIAYFA EVAHAMIPHL    50
ADRPVTRKRW PDGVTTAPFF HKDLPKGTPS WVPRRTIRHS DGPKDYPLVD 100
SPATLAWLGQ IAALELHVPQ WTFGSAAASV AGGDGEITEA VFDAVHPNRL 150
VFDLDPGPGV ELVDCAHVAR AVRERMGGAA LVPVTSGSKG IHLYAWLDGS 200
LTSDDASAYA REIAEAIEQD MPDLVVSRMA KSLRRGKVFI DWSQNNGSKT 250
TIAPYSLRGR EHPTVAAPRT WEELADPELR HLEYTEVLEL LAAAPDPMQG 300
LEDGDNDGAE TRGGSRRRGR GPDTKLDTYR SMRSADKTPE PVPEPGLLPQ 350
GDDDTFVIQE HHARRLHYDF RLERDGVLVS WAVPKGVPES TGRNHLAVHT 400
EDHPMDYADF AGEIPHGEYG GGTVSIWDRG TYATEKWRED EVIIVLHGGK 450
ARGRYALIRT GGKNWLMHRM KDQSPQPKQY DDHRPATPTA PVTARPAPAR 500
STRPEPPKDL RPMLATAGSV EDVADERRWR FEGKWDGIRA IATVGPSGLT 550
LRSRLGNDVT PTYPELAVLA ELLDGHSAVL DGEIVALQDG RTSFHEMQKR 600
MNVQRARDVA RVMRDVPVQF WIFDVLNLDG ISLLDKRYDD RRRILEALPL 650
TGGVCLVPPQ LAGPARDALR GSADRQWEGI VAKLGDSTYQ PGRRSHSWLK 700
IKNFLDLEVV VVGWSPGTGR REGTVGALLL AVPDGAGGLR YAGKVGTGFT 750
DAILDQLMQA LAPLRADRSA VADTIPRADA AGAIWVRPEL VGEVKYGQWT 800
PERRLRATSW RGLRPDKTVA DLIAGSAPPP S 831
Length:831
Mass (Da):91,090
Last modified:November 3, 2009 - v1
Checksum:i1D4EC185FB362C25
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001737 Genomic DNA. Translation: ACV76562.1.
RefSeqiWP_012814037.1. NC_013235.1.
YP_003199551.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV76562; ACV76562; Namu_0128.
GeneIDi8445708.
KEGGinml:Namu_0128.
PATRICi22657752. VBINakMul62011_0131.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001737 Genomic DNA. Translation: ACV76562.1 .
RefSeqi WP_012814037.1. NC_013235.1.
YP_003199551.1. NC_013235.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 479431.Namu_0128.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACV76562 ; ACV76562 ; Namu_0128 .
GeneIDi 8445708.
KEGGi nml:Namu_0128.
PATRICi 22657752. VBINakMul62011_0131.

Phylogenomic databases

eggNOGi COG3285.
HOGENOMi HOG000222509.
KOi K01971.
OMAi SKGIHLY.
OrthoDBi EOG661H49.

Enzyme and pathway databases

BioCyci NMUL479431:GHQL-131-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR002755. DNA_primase_S.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF01896. DNA_primase_S. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEi PS00333. DNA_LIGASE_A2. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104.

Entry informationi

Entry nameiC8XIX5_NAKMY
AccessioniPrimary (citable) accession number: C8XIX5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: September 3, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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