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Protein

Glutamate decarboxylase

Gene

Namu_5339

Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

L-glutamate = 4-aminobutanoate + CO2.UniRule annotation

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. glutamate decarboxylase activity Source: UniProtKB-EC
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. glutamate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

DecarboxylaseUniRule annotation, Lyase

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-5380-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Glutamate decarboxylaseUniRule annotation (EC:4.1.1.15UniRule annotation)
Gene namesi
Ordered Locus Names:Namu_5339Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeNakamurellaceaeNakamurella
ProteomesiUP000002218: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_5339.

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.

Sequencei

Sequence statusi: Complete.

C8XDB3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MALHTGSSEP THPPHTNPMA TLASPAVGDA FALPEISLNE DPVPPDIAYQ
60 70 80 90 100
LIREELLLDG SARLNLATFV TTWMEPQAKQ LMSDCADKNM IDKDEYPQTA
110 120 130 140 150
EIERRCVGII ADLWHAPSPD DATGCSTTGS SEACMLAGMA LKRRWEAKVR
160 170 180 190 200
AEGGDLNVRK PNLVMGANVQ VCWEKFCRYW DVEPKIVPME GERFHLDADG
210 220 230 240 250
AVAAVDENSI GVVAILGSTF DGSYEPVAEI AAALDKLAAS GGPDVPVHVD
260 270 280 290 300
GASGGMIAPF LDPDLEWDFR LPRVSSINTS GHKYGLVYPG VGWVVWRDKD
310 320 330 340 350
HLPDELVFNV NYLGGNMPTF ALNFSRPGSE VIAQYYCFFR LGRSGYVDVQ
360 370 380 390 400
QASRNVAMNL AEQIGELPEF RLITKGDQLP VFAFTTSESV TGWDVFALSR
410 420 430 440 450
RMRERGWQVP AYTFPEHRED LAVLRIVVRN GFSQDMAHLF FQELKGAVQS
460
LNEESTSAAM SGPSGFRH
Length:468
Mass (Da):51,412
Last modified:November 3, 2009 - v1
Checksum:iFCFB7238F8B59EAA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV81603.1.
RefSeqiYP_003204592.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV81603; ACV81603; Namu_5339.
GeneIDi8450972.
KEGGinml:Namu_5339.
PATRICi22668378. VBINakMul62011_5395.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV81603.1.
RefSeqiYP_003204592.1. NC_013235.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479431.Namu_5339.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV81603; ACV81603; Namu_5339.
GeneIDi8450972.
KEGGinml:Namu_5339.
PATRICi22668378. VBINakMul62011_5395.

Phylogenomic databases

eggNOGiCOG0076.
HOGENOMiHOG000070228.
KOiK01580.
OMAiDPDLVWD.
OrthoDBiEOG6TFCPW.

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-5380-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
InterProiIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
[Graphical view]
PANTHERiPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR01788. Glu-decarb-GAD. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104Imported.

Entry informationi

Entry nameiC8XDB3_NAKMY
AccessioniPrimary (citable) accession number: C8XDB3
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: March 4, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.