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C8XCG1 (C8XCG1_NAKMY) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 35. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length396 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding83 – 875GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding138 – 1414GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C8XCG1 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 41B612B60231203B

FASTA39643,449
        10         20         30         40         50         60 
MAKAKFDRSK PHVNIGTIGH VDHGKTTLTA AITKVLADKY PTLNQASAFD QIDKAPEERQ 

        70         80         90        100        110        120 
RGITINIAHV EYQTEKRHYA HVDAPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTKE 

       130        140        150        160        170        180 
HVLLARQVGV PYILVALNKS DMVDDEEILE LVELEVRELL AGQDFDEDAP VIRTSGLKAL 

       190        200        210        220        230        240 
EGDPEWVKTV EDLMDAVDES IPEPERDTDK PFLMPIEDVF TITGRGTVVT GKVERGVINV 

       250        260        270        280        290        300 
NATVEIVGIK PKSFQTTVTG IEMFRKLLDT AQAGDNAGLL LRGTKREDVE RGQVVVKPGS 

       310        320        330        340        350        360 
ITPHTEFEAQ VYILGKDEGG RHTPFFNNYR PQFFFRTTDV TGVVNLPEGT EMVMPGDTTE 

       370        380        390 
MTVQLIQPIA IEEGLRFAIR EGGRTVGAGS VTKIIK 

« Hide

References

[1]"The complete genome of Nakamurella multipartita DSM 44233."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Sims D., Meincke L., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001737 Genomic DNA. Translation: ACV77526.1.
RefSeqYP_003200515.1. NC_013235.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING479431.Namu_1119.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV77526; ACV77526; Namu_1119.
GeneID8446715.
KEGGnml:Namu_1119.
PATRIC22659798. VBINakMul62011_1139.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMADKYPTLN.
OrthoDBEOG6R5C6X.

Enzyme and pathway databases

BioCycNMUL479431:GHQL-1138-MONOMER.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8XCG1_NAKMY
AccessionPrimary (citable) accession number: C8XCG1
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: June 11, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)