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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Namu_0826

Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-841-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Namu_0826Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesFrankineaeNakamurellaceaeNakamurella
ProteomesiUP000002218: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_0826.

Structurei

3D structure databases

ProteinModelPortaliC8X9G9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8X9G9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MQLPVMPPVA PMLAKSVPDI PTGELSYEPK WDGFRSIVFR DGDEVEIGSR
60 70 80 90 100
NEKPMTRYFP ELVEAIKANL PPRCVIDGEI VVIVGDRLEF EVLQQRIHPA
110 120 130 140 150
ASRVRMLAEQ TPASFVGFDL LALGDTDYTG RPFAERRAAL EQAMAGAAAP
160 170 180 190 200
VHLTPATRDP ALAAEWFEQF EGAGLDGVVA KPLTGTYQPD KRTMFKIKHQ
210 220 230 240 250
RTADCVVAGY RVHKSGPDSI GSLLLGLYND AGDLASVGVI GAFPAARRKQ
260 270 280 290 300
LFTELQPLVT TFDEHPWNWA KPDESGARTP RSSEYSRWNV GKDLSFIPLR
310 320 330 340 350
PERVVEVRYE HMEGTRFRHT AQFNRWRPDR DPRSCTYEQL EEPVSYDLAD

ILGR
Length:354
Mass (Da):39,662
Last modified:November 3, 2009 - v1
Checksum:iFFB539DFD9A8204C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV77237.1.
RefSeqiYP_003200226.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV77237; ACV77237; Namu_0826.
GeneIDi8446418.
KEGGinml:Namu_0826.
PATRICi22659188. VBINakMul62011_0838.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV77237.1.
RefSeqiYP_003200226.1. NC_013235.1.

3D structure databases

ProteinModelPortaliC8X9G9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479431.Namu_0826.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV77237; ACV77237; Namu_0826.
GeneIDi8446418.
KEGGinml:Namu_0826.
PATRICi22659188. VBINakMul62011_0838.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
KOiK01971.
OMAiHERTADC.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-841-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104Imported.

Entry informationi

Entry nameiC8X9G9_NAKMY
AccessioniPrimary (citable) accession number: C8X9G9
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: February 4, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.