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Protein
Submitted name:

DNA polymerase LigD, polymerase domain protein

Gene

Namu_0584

Organism
Nakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-591-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA polymerase LigD, polymerase domain proteinImported
Gene namesi
Ordered Locus Names:Namu_0584Imported
OrganismiNakamurella multipartita (strain ATCC 700099 / DSM 44233 / JCM 9543 / Y-104) (Microsphaera multipartita)Imported
Taxonomic identifieri479431 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaNakamurellalesNakamurellaceaeNakamurella
ProteomesiUP000002218 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479431.Namu_0584.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiPDEWRID.
OrthoDBiEOG6FV833.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.

Sequencei

Sequence statusi: Complete.

C8X7D0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MARSRDTSEP VELTVGERTV RVTHPERVYF PATGATKLDL VEYYLSVGDG
60 70 80 90 100
IVNALRERPC MMHRFPEGLA GDKVHQKRLP RGAPPWVQTV TLFFPRFKRT
110 120 130 140 150
ADELCVTELA SVIWAVQMST VEFHPWNSRR ADTEKPDEWR IDLDPMPDCD
160 170 180 190 200
FARVRRVAHV AHEVLDELGA VGWPKTSGGK GLHIYVRIPP QWGFADVRRA
210 220 230 240 250
ALAFAREVER RAPQDVTTAW WRKDRDPAML FVDYNQNARD HTIASAYSVR
260 270 280 290 300
GTPRGTVSTP IRWTEIDDVL PDDFTIATVP ARYAELGDLH AGIDQAVFPI
310 320
DQLLQWADRD ERDGRPDPGG ADAVDLDAP
Length:329
Mass (Da):37,186
Last modified:November 3, 2009 - v1
Checksum:i826C57786E283C3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76999.1.
RefSeqiWP_015745916.1. NC_013235.1.

Genome annotation databases

EnsemblBacteriaiACV76999; ACV76999; Namu_0584.
KEGGinml:Namu_0584.
PATRICi22658676. VBINakMul62011_0589.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001737 Genomic DNA. Translation: ACV76999.1.
RefSeqiWP_015745916.1. NC_013235.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479431.Namu_0584.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV76999; ACV76999; Namu_0584.
KEGGinml:Namu_0584.
PATRICi22658676. VBINakMul62011_0589.

Phylogenomic databases

eggNOGiCOG3285.
HOGENOMiHOG000244654.
OMAiPDEWRID.
OrthoDBiEOG6FV833.

Enzyme and pathway databases

BioCyciNMUL479431:GHQL-591-MONOMER.

Family and domain databases

InterProiIPR002755. DNA_primase_S.
IPR014145. LigD_pol_dom.
[Graphical view]
PfamiPF01896. DNA_primase_S. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 700099 / DSM 44233 / JCM 9543 / Y-104Imported.

Entry informationi

Entry nameiC8X7D0_NAKMY
AccessioniPrimary (citable) accession number: C8X7D0
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: July 22, 2015
This is version 33 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.