C8X4S3 (C8X4S3_DESRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative uncharacterized protein EMBL ACV69296.1

Gene names

Ordered Locus Names:

Dret_2012

Organism

Desulfohalobium retbaense (strain DSM 5692) [Complete proteome] [HAMAP]

Taxonomic identifier

485915 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfohalobiaceae › Desulfohalobium › Desulfohalobium retbaense

Protein attributes

Sequence length	384 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Molecular_function	iron-sulfur cluster binding Inferred from electronic annotation. Source: InterPro oxidoreductase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8X4S3 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: 670DE0F820720BB6	FASTA	384	41,546
	10 20 30 40 50 60 MERFASDIHR GECVMCGKCL EVCPLFQATD NEELSPRAKA DLLQAMAGGG DLSEAAVRRL 70 80 90 100 110 120 AGICLGCQRC RDVCPQNVDV PRQLQALKAA HPGWRNWIWG RLVDNAPRLY PLLAAWGRRA 130 140 150 160 170 180 PGLAPSSRRE LLRSLGRNRS LPDQVETGKA REGLVQEACM LFPGCAARFA KTGWLGTTEA 190 200 210 220 230 240 VLKQAADTVL ATPDWACCGF TLGQAGLPEE QHRLQAENVR LWREAGRPRL VVFCATCLAG 250 260 270 280 290 300 LQAYGALDDV WQDAAERDAW LTCLTPLWRL IPEPGPVPVP PLAGFKVVAH SPCHSEAGEG 310 320 330 340 350 360 QWLAAVLRSQ GAEVLSLDQC CGLGGSMQLE HPELCTRVGH AFWDRVPSQI DAVVTGCAGC 370 380 VIQLGATAPA GIQVGHWLEL LTTQ

References

[1]

"The complete chromosome of Desulfohalobium retbaense DSM 5692." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5692.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001734 Genomic DNA. Translation: ACV69296.1.
RefSeq	YP_003198874.1. NC_013223.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	485915.Dret_2012.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV69296; ACV69296; Dret_2012.
GeneID	8419857.
KEGG	drt:Dret_2012.
PATRIC	21701126. VBIDesRet71890_2125.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0247.
HOGENOM	HOG000228294.
KO	K11473.
OMA	LVTFCAT.
ProtClustDB	CLSK704877.
Enzyme and pathway databases
BioCyc	DRET485915:GHRJ-2107-MONOMER.
Family and domain databases
Gene3D	1.10.1060.10. 1 hit.
InterPro	IPR017896. 4Fe4S_Fe-S-bd. IPR017900. 4Fe4S_Fe_S_CS. IPR004017. Cys_rich_dom. IPR012285. Fum_reductase_C. IPR009051. Helical_ferredxn. [Graphical view]
Pfam	PF02754. CCG. 2 hits. PF13183. Fer4_8. 1 hit. [Graphical view]
SUPFAM	SSF46548. Helical_ferredxn. 1 hit.
PROSITE	PS00198. 4FE4S_FER_1. 2 hits. PS51379. 4FE4S_FER_2. 2 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8X4S3_DESRD

Accession

Primary (citable) accession number: C8X4S3

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 21 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)