Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

C8X4S3 (C8X4S3_DESRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein attributes

Sequence length384 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functioniron-sulfur cluster binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C8X4S3 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 670DE0F820720BB6

FASTA38441,546
        10         20         30         40         50         60 
MERFASDIHR GECVMCGKCL EVCPLFQATD NEELSPRAKA DLLQAMAGGG DLSEAAVRRL 

        70         80         90        100        110        120 
AGICLGCQRC RDVCPQNVDV PRQLQALKAA HPGWRNWIWG RLVDNAPRLY PLLAAWGRRA 

       130        140        150        160        170        180 
PGLAPSSRRE LLRSLGRNRS LPDQVETGKA REGLVQEACM LFPGCAARFA KTGWLGTTEA 

       190        200        210        220        230        240 
VLKQAADTVL ATPDWACCGF TLGQAGLPEE QHRLQAENVR LWREAGRPRL VVFCATCLAG 

       250        260        270        280        290        300 
LQAYGALDDV WQDAAERDAW LTCLTPLWRL IPEPGPVPVP PLAGFKVVAH SPCHSEAGEG 

       310        320        330        340        350        360 
QWLAAVLRSQ GAEVLSLDQC CGLGGSMQLE HPELCTRVGH AFWDRVPSQI DAVVTGCAGC 

       370        380 
VIQLGATAPA GIQVGHWLEL LTTQ 

« Hide

References

[1]"The complete chromosome of Desulfohalobium retbaense DSM 5692."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 5692.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001734 Genomic DNA. Translation: ACV69296.1.
RefSeqYP_003198874.1. NC_013223.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING485915.Dret_2012.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV69296; ACV69296; Dret_2012.
GeneID8419857.
KEGGdrt:Dret_2012.
PATRIC21701126. VBIDesRet71890_2125.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0247.
HOGENOMHOG000228294.
KOK11473.
OMATEDEMNN.
OrthoDBEOG6FBWTM.

Enzyme and pathway databases

BioCycDRET485915:GHRJ-2055-MONOMER.

Family and domain databases

InterProIPR017896. 4Fe4S_Fe-S-bd.
IPR017900. 4Fe4S_Fe_S_CS.
IPR004017. Cys_rich_dom.
IPR009051. Helical_ferredxn.
[Graphical view]
PfamPF02754. CCG. 2 hits.
PF13183. Fer4_8. 1 hit.
[Graphical view]
SUPFAMSSF46548. SSF46548. 1 hit.
PROSITEPS00198. 4FE4S_FER_1. 2 hits.
PS51379. 4FE4S_FER_2. 2 hits.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8X4S3_DESRD
AccessionPrimary (citable) accession number: C8X4S3
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 14, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)