C8X0P1 (C8X0P1_DESRD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Lysine 2,3-aminomutase YodO family protein EMBL ACV67988.1
EC=5.4.3.2 EMBL ACV67988.1

Gene names

Ordered Locus Names:

Dret_0696

Organism

Desulfohalobium retbaense (strain DSM 5692) [Complete proteome] [HAMAP]

Taxonomic identifier

485915 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › delta/epsilon subdivisions › Deltaproteobacteria › Desulfovibrionales › Desulfohalobiaceae › Desulfohalobium › Desulfohalobium retbaense

Protein attributes

Sequence length	440 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Isomerase EMBL ACV67988.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	metabolic process Inferred from electronic annotation. Source: GOC
Molecular_function	lysine 2,3-aminomutase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8X0P1 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: F0BC640696BA1D3C	FASTA	440	50,323
	10 20 30 40 50 60 MKIYSEQQQE IAEKISPTAT KSNWTDWKWQ LRHSISDLAT VEKLLDIEFD PEKRKQYAKT 70 80 90 100 110 120 MEIFPMSVTP YYLSLIDTED YENDPVFKQA IPLPDELDIA VHDMKDPLSE DEDSPAPGIT 130 140 150 160 170 180 HRYPDRVLFH VSNTCSMYCR HCTRKRKVGD SDFVPCRDDL QAGLDYIRNT PQVRDVLLSG 190 200 210 220 230 240 GDPFMLPDHQ IDWLLGQLRS IEHVEVIRIG SRMPVVLPYR ITDNLVSILK KHHPLWLNTH 250 260 270 280 290 300 FNHPRELTQS SRKALAKLAD AGIPLGNQTV LLAGVNDCPR LMKTLIHKLV QNRVRPYYLY 310 320 330 340 350 360 QCDLSEGLTH FRTPVGKGIE IIESLIGHTS GFAVPTYVID APGGGGKIPV MPNYIVSWGT 370 380 390 400 410 420 NKVILRNYEG VITTYTEPDC YQVTYCDRDC DNCNLTLKLS DAEEYRAIGI EKLLSDWDET 430 440 CSLTPQDTER LERRDDNGDD

References

[1]

"The complete chromosome of Desulfohalobium retbaense DSM 5692." US DOE Joint Genome Institute (JGI-PGF) Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R. , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Klenk H.-P., Eisen J.A. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 5692.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001734 Genomic DNA. Translation: ACV67988.1.
RefSeq	YP_003197566.1. NC_013223.1.
3D structure databases
ProteinModelPortal	C8X0P1.
ModBase	Search...
Protein-protein interaction databases
STRING	485915.Dret_0696.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV67988; ACV67988; Dret_0696.
GeneID	8418509.
KEGG	drt:Dret_0696.
PATRIC	21698304. VBIDesRet71890_0744.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1509.
HOGENOM	HOG000223518.
KO	K01843.
OMA	KKYHPIW.
ProtClustDB	CLSK926256.
Enzyme and pathway databases
BioCyc	DRET485915:GHRJ-759-MONOMER.
Family and domain databases
Gene3D	3.20.20.70. 1 hit.
InterPro	IPR013785. Aldolase_TIM. IPR025895. LAM_C_dom. IPR022459. Lysine_aminomutase. IPR003739. Lysine_aminomutase_fam. [Graphical view]
Pfam	PF12544. LAM_C. 1 hit. [Graphical view]
PIRSF	PIRSF004911. DUF160. 1 hit.
TIGRFAMs	TIGR03820. lys_2_3_AblA. 1 hit. TIGR00238. TIGR00238. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C8X0P1_DESRD

Accession

Primary (citable) accession number: C8X0P1

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)