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C8X0B1 (C8X0B1_DESRD) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length386 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequences

Sequence LengthMass (Da)Tools
C8X0B1 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 56E8F85C516C4001

FASTA38641,541
        10         20         30         40         50         60 
MDERQVYWIE GDGIGAEVWR AARPVLDGAI RAAYGESRRL VWEELLAGEK AYAETGNYLP 

        70         80         90        100        110        120 
EATLAALQGA DLAMKGPLAT PVGTGFRSLN VTLRQTLELY ACIRPVQYFQ GIESPLKAPE 

       130        140        150        160        170        180 
KVDMVVFREN TEDVYAGIEW PAGSKEARKL AAFLREELGA RIDDLAGIGI KPMTEKGSKR 

       190        200        210        220        230        240 
LVRKALQFAL DQRRESVTLV HKGNIMKYTE GAFRGWGYEL AEEEFGTQTV TESQDAGGKL 

       250        260        270        280        290        300 
VVKDRIADAM FQEVLISPEK YDVIATTNLN GDYLSDALAA QVGGLGLAPG VNMSDQLGFF 

       310        320        330        340        350        360 
EPTHGTAPTI AGQDKANPGS LILSGALLLD HIGWHEAAGL VRAGVEAALA TKEVTVDLAS 

       370        380 
QISGAKTVGC QGFGERILQG VEDAAQ 

« Hide

References

[1]"The complete chromosome of Desulfohalobium retbaense DSM 5692."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Mikhailova N., Munk A.C., Brettin T., Detter J.C., Han C., Tapia R. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Spring S., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 5692.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001734 Genomic DNA. Translation: ACV67736.1.
RefSeqYP_003197314.1. NC_013223.1.

3D structure databases

ProteinModelPortalC8X0B1.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING485915.Dret_0439.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV67736; ACV67736; Dret_0439.
GeneID8418244.
KEGGdrt:Dret_0439.
PATRIC21697758. VBIDesRet71890_0478.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0538.
HOGENOMHOG000021113.
KOK00031.
OMARYAIDND.
OrthoDBEOG6SNDTP.

Enzyme and pathway databases

BioCycDRET485915:GHRJ-441-MONOMER.

Family and domain databases

Gene3D3.40.718.10. 1 hit.
InterProIPR019818. IsoCit/isopropylmalate_DH_CS.
IPR001804. Isocitrate/isopropylmalate_DH.
IPR024084. IsoPropMal-DH-like_dom.
[Graphical view]
PANTHERPTHR11835. PTHR11835. 1 hit.
PfamPF00180. Iso_dh. 1 hit.
[Graphical view]
PROSITEPS00470. IDH_IMDH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8X0B1_DESRD
AccessionPrimary (citable) accession number: C8X0B1
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 14, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)