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C8WXQ5 (C8WXQ5_ALIAD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 39. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length610 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision By similarity. HAMAP-Rule MF_00203 SAAS SAAS001162

Subunit structure

Interacts with UvrB in an incision complex By similarity. HAMAP-Rule MF_00203 SAAS SAAS001162

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00203 SAAS SAAS001162.

Sequence similarities

Belongs to the UvrC family. HAMAP-Rule MF_00203

Contains 1 GIY-YIG domain. HAMAP-Rule MF_00203

Contains 1 UVR domain. HAMAP-Rule MF_00203

Contains GIY-YIG domain. SAAS SAAS001162

Contains UVR domain. SAAS SAAS001162

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain14 – 9178GIY-YIG By similarity HAMAP-Rule MF_00203
Domain196 – 23136UVR By similarity HAMAP-Rule MF_00203

Sequences

Sequence LengthMass (Da)Tools
C8WXQ5 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 6798D19B5FAF965B

FASTA61069,889
        10         20         30         40         50         60 
MNQVIRDKLD LLPQRPGVYL MKGEGGEILY VGKAKVLRNR VRSYFTGTHD TKTQVLVSQI 

        70         80         90        100        110        120 
RDFEYIVTDT VAEALLLECN LIKQHQPPYN IMLRDDKSYP YIKLTKERHP RLQIVRQVKR 

       130        140        150        160        170        180 
DGAKYFGPYP NATSAQATKR LLDRLYPLRK CKTLKKQVCL YYHIHQCLAP CVYDVDEATY 

       190        200        210        220        230        240 
EAMAKEISHF LNGGHQDVVR ELEQKMQAAA ESLEFERAAE LRDLIRHIEQ VMQEQKVTWT 

       250        260        270        280        290        300 
DGIDRDVFGF AEDRGLLSVQ VFFVRNGKLI ERQVQIAPHF DDPLTDFMSF VEQFYHERVD 

       310        320        330        340        350        360 
LPKEILLPEG VPSEALAMVV DAKVLQPKRG PKRDLVDLAC ENARQALAEK IQLIDRNLDR 

       370        380        390        400        410        420 
TLGAVMELGQ VLAIQPPRRI EAFDNSNFQG VDAVSAMVVF IDGKPAKSEY RKYKIRSTQG 

       430        440        450        460        470        480 
PDDYEAIREV VRRRYSRLVR EQKPLPDLVV IDGGKGQLRA ALSVLEGELG LEIPVCGLAK 

       490        500        510        520        530        540 
DERHRTSQLF FMDEEEPVRI ERHSPAFYLL ERIQDEVHRF AVEFHRLRRS KTGFQSILDE 

       550        560        570        580        590        600 
IPGVGPERKK AILRRFGSLK AVAAAQPEDF RGLGIGDKLA REIVARVREE LAARKQADGE 

       610 
MEISSEAPFS 

« Hide

References

[1]"The complete chromosome of Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446."
US DOE Joint Genome Institute (JGI-PGF)
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Chertkov O., Sims D., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27009 / DSM 446 / 104-1A.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001727 Genomic DNA. Translation: ACV58876.1.
RefSeqYP_003185265.1. NC_013205.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING521098.Aaci_1864.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV58876; ACV58876; Aaci_1864.
GeneID8425381.
KEGGaac:Aaci_1864.
PATRIC20847162. VBIAliAci73240_1814.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0322.
HOGENOMHOG000279960.
KOK03703.
OMAQKLFPIR.
OrthoDBEOG6K13R9.
ProtClustDBCLSK2821224.

Enzyme and pathway databases

BioCycAACI521098:GCIO-1923-MONOMER.

Family and domain databases

Gene3D3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
HAMAPMF_00203. UvrC.
InterProIPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR001943. UVR_dom.
IPR004791. UvrC.
IPR001162. UvrC_homol_region.
[Graphical view]
PfamPF01541. GIY-YIG. 1 hit.
PF02151. UVR. 1 hit.
PF08459. UvrC_HhH_N. 1 hit.
[Graphical view]
SMARTSM00465. GIYc. 1 hit.
SM00278. HhH1. 1 hit.
[Graphical view]
SUPFAMSSF46600. SSF46600. 1 hit.
SSF47781. SSF47781. 1 hit.
SSF82771. SSF82771. 1 hit.
TIGRFAMsTIGR00194. uvrC. 1 hit.
PROSITEPS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
PS50165. UVRC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8WXQ5_ALIAD
AccessionPrimary (citable) accession number: C8WXQ5
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: April 16, 2014
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)