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C8WV64 (C8WV64_ALIAD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
L-arabinose isomerase HAMAP MF_00519
EC=5.3.1.4 HAMAP MF_00519
Gene names
Name:araA HAMAP MF_00519
Ordered Locus Names:Aaci_2897
OrganismAlicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) (Bacillus acidocaldarius) [Complete proteome] [HAMAP]
Taxonomic identifier521098 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacillales › Alicyclobacillaceae › Alicyclobacillus

Protein attributes

Sequence length494 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the conversion of L-arabinose to L-ribulose By similarity. HAMAP MF_00519 SAAS SAAS003762

Catalytic activity

L-arabinose = L-ribulose. HAMAP MF_00519 SAAS SAAS003762

Cofactor

Binds 1 manganese ion per subunit By similarity. HAMAP MF_00519 SAAS SAAS003762

Pathway

Carbohydrate degradation; L-arabinose degradation via L-ribulose; D-xylulose 5-phosphate from L-arabinose (bacterial route): step 1/3. HAMAP MF_00519 SAAS SAAS003762

Sequence similarities

Belongs to the arabinose isomerase family. HAMAP MF_00519

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding3051Manganese By similarity HAMAP MF_00519
Metal binding3301Manganese By similarity HAMAP MF_00519
Metal binding3471Manganese By similarity HAMAP MF_00519
Metal binding4461Manganese By similarity HAMAP MF_00519

Sequences

Sequence LengthMass (Da)Tools
C8WV64 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: B1F6E5973A3AA908

FASTA49454,791
        10         20         30         40         50         60 
MKMPAYEFWF VVGSQHLYGE EALAQVEAHA REMVPALQAA VGNTLTLRWK GVLKNADEIR 

        70         80         90        100        110        120 
RLCLEASADD ACAGVIAWMH TFSPAKMWIR GLMALQKPLL HLHTQFNRDI PWDTIDMDFM 

       130        140        150        160        170        180 
NLNQSAHGDR EFGFMVSRLG MSRKVIVGHW QDAELARRIR GWALTAVAAA VSRGLKVARF 

       190        200        210        220        230        240 
GDNMRQVAVT EGDKVEAEAQ FGWSVNGYGV GDLAERVRAV SEAEIDRLID EYQTFYDFAP 

       250        260        270        280        290        300 
GCEKGGPLHD AVREQARIEL GLRSFLEEGG FEAFTTTFED LHGLRQLPGL AVQRLMADGY 

       310        320        330        340        350        360 
GFGGEGDWKT AAFVRVLKVL AEGEGTSFME DYTYHFEPGN EMVLGAHMLE VCPTIAATRP 

       370        380        390        400        410        420 
SVEVHPLSIG GKEDPARLVF DGASGPAVQA TIVDLGHRFR MVVNKVEAIQ PDRPMPKLPV 

       430        440        450        460        470        480 
ARVLWKPLPS LASAAESWIL AGGAHHTVFS YRVTVEQLQD LADMMGVECV VIDEHSTPRQ 

       490 
IANELRWNDA VYGR

« Hide

References

[1]"The complete chromosome of Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Kyrpides N., Mavromatis K., Ivanova N., Ovchinnikova G., Chertkov O., Sims D., Brettin T., Detter J.C., Han C. expand/collapse author list , Larimer F., Land M., Hauser L., Markowitz V., Cheng J.-F., Hugenholtz P., Woyke T., Wu D., Pukall R., Klenk H.-P., Eisen J.A.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 27009 / DSM 446 / 104-1A.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001727 Genomic DNA. Translation: ACV59901.1.
RefSeqYP_003186290.1. NC_013205.1.

3D structure databases

ProteinModelPortalC8WV64.
ModBaseSearch...

Protein-protein interaction databases

STRINGC8WV64.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8426438.
GenomeReviewsGene locus Aaci_2897 in contig CP001727_GR.
KEGGaac:Aaci_2897.
PATRIC20849358. VBIAliAci73240_2891.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAEVCPTIA.
ProtClustDBPRK02929.

Family and domain databases

HAMAPMF_00519. Arabinose_Isome.
[Tree]
InterProIPR024664. Ara_Isoase_C.
IPR004216. Fuc/Ara_isomerase_C.
IPR009015. Fucose_isomerase_N/cen.
IPR003762. Lara_isomerase.
[Graphical view]
KOK01804.
PfamPF11762. Arabinose_Iso_C. 1 hit.
PF02610. Arabinose_Isome. 1 hit.
[Graphical view]
PIRSFPIRSF001478. L-ara_isomerase. 1 hit.
ProDomPD018364. Lara_isomerase. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMSSF50443. Fuc_isomerase_C. 1 hit.
SSF53743. Fuc_isomerase_N. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC8WV64_ALIAD
AccessionPrimary (citable) accession number: C8WV64
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: December 14, 2011
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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