C8WN09 (C8WN09_EGGLE) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Elen_2785

Organism

Eggerthella lenta (strain ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255) (Eubacterium lentum) [Complete proteome] [HAMAP]

Taxonomic identifier

479437 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Coriobacteridae › Coriobacteriales › Coriobacterineae › Coriobacteriaceae › Eggerthella › Eggerthella lenta

Protein attributes

Sequence length	441 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACV56732.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8WN09 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: D53B377D9FCFAAEA	FASTA	441	47,990
	10 20 30 40 50 60 MGTPRYVGEQ PPAGNAANKG AYEAATAAFS SGAEGAFQYA RDHARPDGEP AQFDPDKLRL 70 80 90 100 110 120 IPDVDRRWSW TEIDLNAIRH NTSAVKQRID NGVRLMAVVK ADGYGHGAVR CAKTALNSGA 130 140 150 160 170 180 DYLGVATVNE AIELREALVN APILVLSQPP ETAIPLLLAY KVMPSVYTSE FAIQYAEAAD 190 200 210 220 230 240 AYGVRAPYHL AVNTGMNRIG VRHDEVVEFM GQVSFHRALD LVGTFTHFAT ADSAETLDFQ 250 260 270 280 290 300 IQVKRFIEAV TALRTAGVNP GIVHAANSAA AIRYPDVQFD MVRLGIAMYG LHPSGVTRPM 310 320 330 340 350 360 IDLHPAMSVH ARITDVRTVP MSEGVSYGMN YRSPGSVKIC TVPVGYADGL RRGLSGRTDV 370 380 390 400 410 420 ILKGQRCHQV GNICMDQCMF EVDLRVYGSR RRLDPMIGDE VLLVGREGDS VITLDDMANT 430 440 LGTINYELAC GFSLRMPRVY V

References

[1]

"Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255)." Saunders E., Pukall R., Abt B., Lapidus A., Glavina Del Rio T., Copeland A., Tice H., Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K., Ovchinnikova G., Pati A. , Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Meincke L., Sims D., Brettin T., Detter J.C., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Han C. Stand. Genomic Sci. 1:174-182(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 25559 / DSM 2243 / JCM 9979 / NCTC 11813 / VPI 0255.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001726 Genomic DNA. Translation: ACV56732.1.
RefSeq	YP_003183121.1. NC_013204.1.
3D structure databases
ProteinModelPortal	C8WN09.
ModBase	Search...
Protein-protein interaction databases
STRING	479437.Elen_2785.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV56732; ACV56732; Elen_2785.
GeneID	8417111.
KEGG	ele:Elen_2785.
PATRIC	21846353. VBIEggLen106823_2859.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
ProtClustDB	CLSK2555235.
Enzyme and pathway databases
BioCyc	ELEN479437:GHWY-2836-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8WN09_EGGLE

Accession

Primary (citable) accession number: C8WN09

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 27 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)