Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Putative PAS/PAC sensor protein

Gene

Apar_0916

Organism
Atopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. signal transducer activity Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciAPAR521095:GH57-948-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Putative PAS/PAC sensor proteinImported
Gene namesi
Ordered Locus Names:Apar_0916Imported
OrganismiAtopobium parvulum (strain ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546) (Streptococcus parvulus) (Peptostreptococcus parvulus)Imported
Taxonomic identifieri521095 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCoriobacteridaeCoriobacterialesCoriobacterineaeCoriobacteriaceaeAtopobium
ProteomesiUP000000960: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi521095.Apar_0916.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000101194.
OMAiCELQSAN.
OrthoDBiEOG66QKXZ.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8W7A6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MADNKLSVRR VEGVVDGTVA ATLSQLLRLT SDAVIVFNME GIVLLANEEA
60 70 80 90 100
ETLFAKADGT IAGLDVRFLF APANQENLQE AFSVESLPFA IDGSTSMVTA
110 120 130 140 150
PSQDGTSQVL SVRADYVGAP TQAIVLSASK LRDLSSSMHD DERMVLDLRR
160 170 180 190 200
ANKRLSGALQ IVLDTLDSED MSQLIERVLE ELSETVEADG ALIYLAEQDG
210 220 230 240 250
YHLHGVTESL RSALLSGIPR YFAFNSSLER LLFYSEHALR LHTVPLNSDA
260 270 280 290 300
LKQGRVKKRN LVNEETREVI TVDASHLPPF TSFLVVPVWF GGHIVALIEV
310 320 330 340 350
GWERKRALLV EDARLLDSIA NYLSVQLVGA LSAMRTQRRD MLREALARVR
360 370 380 390 400
QGLLHSTAEG EKISGERLQQ VMRSVGTDLN TQVFSIDCCE VTGNITLHML
410 420 430 440 450
DAEQGFADAQ DGGTQSVAEA DNDAQVTAEQ QDSGKQIALP STVEGLKTGE
460 470 480 490 500
GEASVKEVEL DSELSRALAA QGLPCKGAVL FLGRFAGEQH TWLFLREENA
510 520 530 540 550
EPLSDIEFDF LDRVMLLVHS LVVGAEESQQ NKHISQALQS GMKNELQQVE
560 570 580 590 600
GISAEGIYSS ATADAFVGGD FYSMIKLPGR RACIIMGDVS GKGIEAASIS
610 620 630 640 650
SAVKTALSAY AWEGRTPARM VATLNEFLLG FSRVETFATL FVGIVDLTTS
660 670 680 690 700
SLMYCSAGHP PAILVSAQSG DAELLDVQSG VVGAFHDMEY KNGTVCLHEG
710 720 730 740 750
DILLLYTDGT TEARSPEGAF FGETGLRDMI MNEVPRGFDG LLNRFLNTLD
760 770 780
RYTGRRLDDD VAMVALRFDE LGNADSGKKS N
Length:781
Mass (Da):84,787
Last modified:November 3, 2009 - v1
Checksum:iCA045050A8057646
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001721 Genomic DNA. Translation: ACV51345.1.
RefSeqiWP_012809002.1. NC_013203.1.
YP_003179936.1. NC_013203.1.

Genome annotation databases

EnsemblBacteriaiACV51345; ACV51345; Apar_0916.
GeneIDi8413786.
KEGGiapv:Apar_0916.
PATRICi21007321. VBIAtoPar109073_0891.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001721 Genomic DNA. Translation: ACV51345.1.
RefSeqiWP_012809002.1. NC_013203.1.
YP_003179936.1. NC_013203.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi521095.Apar_0916.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV51345; ACV51345; Apar_0916.
GeneIDi8413786.
KEGGiapv:Apar_0916.
PATRICi21007321. VBIAtoPar109073_0891.

Phylogenomic databases

eggNOGiCOG2208.
HOGENOMiHOG000101194.
OMAiCELQSAN.
OrthoDBiEOG66QKXZ.

Enzyme and pathway databases

BioCyciAPAR521095:GH57-948-MONOMER.

Family and domain databases

Gene3Di3.30.450.40. 1 hit.
InterProiIPR003018. GAF.
IPR029016. GAF_dom_like.
IPR000014. PAS.
IPR001932. PP2C-like_dom.
[Graphical view]
PfamiPF13185. GAF_2. 1 hit.
PF07228. SpoIIE. 1 hit.
[Graphical view]
SMARTiSM00065. GAF. 1 hit.
SM00091. PAS. 1 hit.
SM00331. PP2C_SIG. 1 hit.
[Graphical view]
SUPFAMiSSF55781. SSF55781. 1 hit.
SSF55785. SSF55785. 1 hit.
SSF81606. SSF81606. 1 hit.
PROSITEiPS50112. PAS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 33793 / DSM 20469 / JCM 10300 / VPI 0546Imported.

Entry informationi

Entry nameiC8W7A6_ATOPD
AccessioniPrimary (citable) accession number: C8W7A6
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: January 7, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.