C8VX81 (C8VX81_DESAS) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

Dtox_3770

Organism

Desulfotomaculum acetoxidans (strain ATCC 49208 / DSM 771 / VKM B-1644) [Complete proteome] [HAMAP] EMBL ACV64477.1

Taxonomic identifier

485916 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Clostridia › Clostridiales › Peptococcaceae › Desulfotomaculum › Desulfotomaculum acetoxidans

Protein attributes

Sequence length	373 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. RuleBase RU000608 SAAS SAAS020622
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. RuleBase RU004247 SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000608 SAAS SAAS020622
Molecular function	Isomerase RuleBase RU000608 SAAS SAAS020622 EMBL ACV64477.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8VX81 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: D10D5AE5C4E88DA5	FASTA	373	40,857
	10 20 30 40 50 60 MYEKTTWAEI NLSAIAHNIQ ELRRIAAPGA QLMAVVKADA YGHGAVETAR IALDNGVVIL 70 80 90 100 110 120 AVSRVSEGVA LREAGIDCPV LVLGYLSPGE VLFSLKNDLS HTVFNMQQAE ILSDIATKAG 130 140 150 160 170 180 IKAKVHIKIE TGMGRLGFEA CQAVVEQVIA VTRLSHLKVD GIFTHFAVSD IIDKSYTRQQ 190 200 210 220 230 240 LFRFQEVLRE LHRKGVDIQL KHAANSAAII DMPDTHLNMV RAGIAMYGLY PSEGVDKSRI 250 260 270 280 290 300 VLQPAMSFKT QVGHIKRVPA GYPVSYGCTY ITRRPTLIAT LPVGYADGYS RLLSSRAEVL 310 320 330 340 350 360 IHGQRAPVVG RVCMDQCMID VGHINDPLIG DEVVLWGQQG ESSLPVEEVA EKMGTINYEL 370 VCMVNVRVPR VYI

References

[1]

"Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575)." Spring S., Lapidus A., Schroder M., Gleim D., Sims D., Meincke L., Glavina Del Rio T., Tice H., Copeland A., Cheng J.F., Lucas S., Chen F., Nolan M., Bruce D., Goodwin L., Pitluck S., Ivanova N., Mavromatis K. , Mikhailova N., Pati A., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Saunders E., Brettin T., Detter J.C., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Han C. Stand. Genomic Sci. 1:242-253(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 49208 / DSM 771 / VKM B-1644.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001720 Genomic DNA. Translation: ACV64477.1.
RefSeq	YP_003193100.1. NC_013216.1.
3D structure databases
ProteinModelPortal	C8VX81.
ModBase	Search...
Protein-protein interaction databases
STRING	485916.Dtox_3770.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV64477; ACV64477; Dtox_3770.
GeneID	8430780.
KEGG	dae:Dtox_3770.
PATRIC	21724513. VBIDesAce42372_3841.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0787.
HOGENOM	HOG000031444.
KO	K01775.
OMA	RISESIP.
Enzyme and pathway databases
BioCyc	DACE485916:GHUF-3861-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8VX81_DESAS

Accession

Primary (citable) accession number: C8VX81

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)