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C8UCW6 (C8UCW6_ECO1A) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 28. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:yoeB EMBL BAI36588.1
Ordered Locus Names:ECO111_2740 EMBL BAI36588.1
OrganismEscherichia coli O111:H- (strain 11128 / EHEC) [Complete proteome] [HAMAP] EMBL BAI36588.1
Taxonomic identifier585396 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length84 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical term3D-structure PDB 4BYD
Complete proteome
Gene Ontology (GO)
   Biological_processRNA catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionendonuclease activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C8UCW6 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: C043381C56DC2939

FASTA8410,216
        10         20         30         40         50         60 
MKLIWSEESW DDYLYWQETD KRIVKKINEL IKDTRRTPFE GKGKPEPLKH NLSGFWSRRI 

        70         80 
TEEHRLVYAV TDDSLLIAAC RYHY 

« Hide

References

« Hide 'large scale' references
[1]"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 11128 / EHEC.
[2]"YoeB-ribosome structure: a canonical RNase that requires the ribosome for its specific activity."
Feng S., Chen Y., Kamada K., Wang H., Tang K., Wang M., Gao Y.G.
Nucleic Acids Res. 41:9549-9556(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (3.35 ANGSTROMS).

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010960 Genomic DNA. Translation: BAI36588.1.
RefSeqYP_003235139.1. NC_013364.1.

3D structure databases

PDBe
RCSB PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4BYDX-ray3.35Y/Z1-84[»]
ProteinModelPortalC8UCW6.
SMRC8UCW6. Positions 1-84.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING585396.ECO111_2740.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI36588; BAI36588; ECO111_2740.
GeneID8488960.
KEGGeoi:ECO111_2740.
PATRIC32108794. VBIEscCol143187_2835.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4115.
HOGENOMHOG000216470.
OMAHNLAGFW.
OrthoDBEOG6KWZ5K.
ProtClustDBCLSK905326.

Enzyme and pathway databases

BioCycECOL585396:GJCW-2829-MONOMER.

Family and domain databases

InterProIPR009614. Addiction_module_toxin_Txe/Yoe.
[Graphical view]
PfamPF06769. Plasmid_Txe. 1 hit.
[Graphical view]
TIGRFAMsTIGR02116. toxin_Txe_YoeB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC8UCW6_ECO1A
AccessionPrimary (citable) accession number: C8UCW6
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: April 16, 2014
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)