C8UB10 (C8UB10_ECO10) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Hemolysin D EMBL BAI33962.1

Gene names

Name:	hylD EMBL BAI33962.1
Ordered Locus Names:	ECO103_p29 EMBL BAI33962.1

Encoded on

Plasmid pO103 EMBL BAI33962.1

Organism

Escherichia coli O103:H2 (strain 12009 / EHEC) [Complete proteome] [HAMAP] EMBL BAI33962.1

Taxonomic identifier

585395 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli O103:H2

Protein attributes

Sequence length	479 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Plasmid EMBL BAI33962.1
Gene Ontology (GO)
Biological_process	protein secretion Inferred from electronic annotation. Source: InterPro transmembrane transport Inferred from electronic annotation. Source: InterPro
Cellular_component	Gram-negative-bacterium-type cell wall Inferred from electronic annotation. Source: InterPro integral to membrane Inferred from electronic annotation. Source: InterPro
Molecular_function	protein transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8UB10 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: F664B17101D95693	FASTA	479	54,524
	10 20 30 40 50 60 MRFYMKGLWD LVCRYKTVFS DVWKIRHTLD APVREKDEYA FLPAHLELIE TPVSRRSHFV 70 80 90 100 110 120 VWSILLFVII SLLLSVLGKV EVVSVANGKF THSGRSKEIK PIENAIVEKI MVKDGSFVKK 130 140 150 160 170 180 NDPLVELTVP GVESDILKSE ASLLYEKTEQ YRYAILSESI QRNELPEIRI TDFPGGEDNA 190 200 210 220 230 240 GGEHFQRVSS LIKEQFMTWQ NRKNQKQLTL NKKIVERDAA LARVSLYEHQ VSQEGRKLND 250 260 270 280 290 300 FKYLLNKKAV SQHSVMEQEN SYIQAKNEHA VWLAQVSQLE KEIELVREEL ALETNIFRSE 310 320 330 340 350 360 IIEKHRKSTD NIVLLEHELE KNRQRKASSF IKAPVSGTVQ ELNIHTEGGV VTTAETLMII 370 380 390 400 410 420 VPDNDILEVT ASVLNKDIGF IQPGQEVVIK VDAYPYTRHG YLTGKVKNIT ADSVSVPDTG 430 440 450 460 470 LVFNVIISVD RNDIQGERKK IPVTAGMTVM AEIKTGVRSV ISYLLSPLKE TINESLRER

References

[1]

"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli." Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T. Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12009 / EHEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010959 Genomic DNA. Translation: BAI33962.1.
RefSeq	YP_003225096.1. NC_013354.1.
3D structure databases
ProteinModelPortal	C8UB10.
ModBase	Search...
Protein-protein interaction databases
STRING	585395.ECO103_p29.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAI33962; BAI33962; ECO103_p29.
GeneID	8470531.
KEGG	eoh:ECO103_p29.
PATRIC	32102891. VBIEscCol146794_5554.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0845.
HOGENOM	HOG000274493.
KO	K11003.
OMA	DEPYFQN.
ProtClustDB	CLSK862060.
Enzyme and pathway databases
BioCyc	ECOL585395:GJA9-5485-MONOMER.
Family and domain databases
InterPro	IPR006143. RND_pump_MFP. IPR003997. Rtx_secretion_protD_GmN_bac. IPR006144. Secretion_HlyD_CS. IPR010129. T1SS_HlyD. [Graphical view]
Pfam	PF00529. HlyD. 1 hit. [Graphical view]
PRINTS	PR01490. RTXTOXIND.
TIGRFAMs	TIGR01843. type_I_hlyD. 1 hit.
PROSITE	PS00543. HLYD_FAMILY. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8UB10_ECO10

Accession

Primary (citable) accession number: C8UB10

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)