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C8U1J4 (C8U1J4_ECO10) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gcd EMBL BAI29002.1
Ordered Locus Names:ECO103_0124 EMBL BAI29002.1
OrganismEscherichia coli O103:H2 (strain 12009 / EHEC) [Complete proteome] [HAMAP] EMBL BAI29002.1
Taxonomic identifier585395 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length796 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
C8U1J4 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 5F12FE26CC71FAA3

FASTA79686,773
        10         20         30         40         50         60 
MAINNTGSRR LLVTLTALFA ALCGLYLLIG GGWLVAIGGS WYYPIAGLVM LGVAWMLWRS 

        70         80         90        100        110        120 
KRAALWLYAA LLLGTMIWGV WEVGFDFWAL TPRSDILVFF GIWLILPFVW RRLVIPASGA 

       130        140        150        160        170        180 
VAALVVALLI SGGILTWAGF NDPQEINGTL SANATPAEAI SPVADQDWPA YGRNQEGQRF 

       190        200        210        220        230        240 
SPLKQINADN VHNLKEAWVF RTGDVKQPND PGEITNEVTP IKVGDTLYLC TAHQRLFALD 

       250        260        270        280        290        300 
AASGKEKWHY DPELKTNESF QHVTCRGVSY HEAKAETASP EVMADCPRRI ILPVNDGRLI 

       310        320        330        340        350        360 
AINAENGKLC ETFANKGVLN LQSNMPDTKP GLYEPTSPPI ITDKTIVMAG SVTDNFSTRE 

       370        380        390        400        410        420 
TSGVIRGFDV NTGELLWAFD PGAKDPNAIP SDEHTFTFNS PNSWAPAAYD AKLDLVYLPM 

       430        440        450        460        470        480 
GVTTPDIWGG NRTPEQERYA SSILALNATT GKLAWSYQTV HHDLWDMDLP AQPTLADITV 

       490        500        510        520        530        540 
NGQKVPVIYA PAKTGNIFVL DRRNGELVVP APEKPVPQGA AKGDYVTPTQ PFSELSFRPK 

       550        560        570        580        590        600 
KDLSGADMWG ATMFDQLVCR VMFHQMRYEG IFTPPSEQGT LVFPGNLGMF EWGGISVDPN 

       610        620        630        640        650        660 
REVAIANPMA LPFVSKLIPR GPGNPMEQPK DAKGTGTESG IQPQYGVPYG VTLNPFLSPF 

       670        680        690        700        710        720 
GLPCKQPAWG YISALDLKTN EVVWKKRIGT PQDSMPFPMP VPVPFNMGMP MLGGPISTAG 

       730        740        750        760        770        780 
NVLFIAATAD NYLRAYNMSN GEKLWQGRLP AGGQATPMTY EVNGKQYVVI SAGGHGSFGT 

       790 
KMGDYIVAYA LPDDVK 

« Hide

References

[1]"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12009 / EHEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010958 Genomic DNA. Translation: BAI29002.1.
RefSeqYP_003220136.1. NC_013353.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING585395.ECO103_0124.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI29002; BAI29002; ECO103_0124.
GeneID8474968.
KEGGeoh:ECO103_0124.
PATRIC32091779. VBIEscCol146794_0124.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG4993.
HOGENOMHOG000116843.
KOK00117.
OMADGDWPAY.
OrthoDBEOG68Q0MR.
ProtClustDBCLSK879560.

Enzyme and pathway databases

BioCycECOL585395:GJA9-125-MONOMER.

Family and domain databases

Gene3D2.140.10.10. 2 hits.
InterProIPR017511. PQQ-dep_membr-bd_DH.
IPR018391. PQQ_beta_propeller_repeat.
IPR002372. PQQ_repeat.
IPR027295. Quinonprotein_ADH-like_fam.
IPR011047. Quinonprotein_ADH-like_supfam.
IPR001479. Quinoprotein_DH_CS.
[Graphical view]
PfamPF01011. PQQ. 3 hits.
[Graphical view]
SMARTSM00564. PQQ. 6 hits.
[Graphical view]
SUPFAMSSF50998. SSF50998. 2 hits.
TIGRFAMsTIGR03074. PQQ_membr_DH. 1 hit.
PROSITEPS00363. BACTERIAL_PQQ_1. 1 hit.
PS00364. BACTERIAL_PQQ_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8U1J4_ECO10
AccessionPrimary (citable) accession number: C8U1J4
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: February 19, 2014
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)