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Protein
Submitted name:

Glucose dehydrogenase

Gene

gcd

Organism
Escherichia coli O103:H2 (strain 12009 / EHEC)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. oxidoreductase activity, acting on CH-OH group of donors Source: InterPro
  2. quinone binding Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciECOL585395:GJA9-125-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glucose dehydrogenaseImported
Gene namesi
Name:gcdImported
Ordered Locus Names:ECO103_0124Imported
OrganismiEscherichia coli O103:H2 (strain 12009 / EHEC)Imported
Taxonomic identifieri585395 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000000959: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. integral component of membrane Source: InterPro
  2. outer membrane-bounded periplasmic space Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi585395.ECO103_0124.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4993.
HOGENOMiHOG000116843.
KOiK00117.
OMAiDGDWPAY.
OrthoDBiEOG68Q0MR.

Family and domain databases

Gene3Di2.140.10.10. 2 hits.
InterProiIPR017511. PQQ-dep_membr-bd_DH.
IPR018391. PQQ_beta_propeller_repeat.
IPR002372. PQQ_repeat.
IPR027295. Quinonprotein_ADH-like_fam.
IPR011047. Quinonprotein_ADH-like_supfam.
IPR001479. Quinoprotein_DH_CS.
[Graphical view]
PfamiPF01011. PQQ. 3 hits.
[Graphical view]
SMARTiSM00564. PQQ. 6 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 2 hits.
TIGRFAMsiTIGR03074. PQQ_membr_DH. 1 hit.
PROSITEiPS00363. BACTERIAL_PQQ_1. 1 hit.
PS00364. BACTERIAL_PQQ_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8U1J4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAINNTGSRR LLVTLTALFA ALCGLYLLIG GGWLVAIGGS WYYPIAGLVM
60 70 80 90 100
LGVAWMLWRS KRAALWLYAA LLLGTMIWGV WEVGFDFWAL TPRSDILVFF
110 120 130 140 150
GIWLILPFVW RRLVIPASGA VAALVVALLI SGGILTWAGF NDPQEINGTL
160 170 180 190 200
SANATPAEAI SPVADQDWPA YGRNQEGQRF SPLKQINADN VHNLKEAWVF
210 220 230 240 250
RTGDVKQPND PGEITNEVTP IKVGDTLYLC TAHQRLFALD AASGKEKWHY
260 270 280 290 300
DPELKTNESF QHVTCRGVSY HEAKAETASP EVMADCPRRI ILPVNDGRLI
310 320 330 340 350
AINAENGKLC ETFANKGVLN LQSNMPDTKP GLYEPTSPPI ITDKTIVMAG
360 370 380 390 400
SVTDNFSTRE TSGVIRGFDV NTGELLWAFD PGAKDPNAIP SDEHTFTFNS
410 420 430 440 450
PNSWAPAAYD AKLDLVYLPM GVTTPDIWGG NRTPEQERYA SSILALNATT
460 470 480 490 500
GKLAWSYQTV HHDLWDMDLP AQPTLADITV NGQKVPVIYA PAKTGNIFVL
510 520 530 540 550
DRRNGELVVP APEKPVPQGA AKGDYVTPTQ PFSELSFRPK KDLSGADMWG
560 570 580 590 600
ATMFDQLVCR VMFHQMRYEG IFTPPSEQGT LVFPGNLGMF EWGGISVDPN
610 620 630 640 650
REVAIANPMA LPFVSKLIPR GPGNPMEQPK DAKGTGTESG IQPQYGVPYG
660 670 680 690 700
VTLNPFLSPF GLPCKQPAWG YISALDLKTN EVVWKKRIGT PQDSMPFPMP
710 720 730 740 750
VPVPFNMGMP MLGGPISTAG NVLFIAATAD NYLRAYNMSN GEKLWQGRLP
760 770 780 790
AGGQATPMTY EVNGKQYVVI SAGGHGSFGT KMGDYIVAYA LPDDVK
Length:796
Mass (Da):86,773
Last modified:November 3, 2009 - v1
Checksum:i5F12FE26CC71FAA3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010958 Genomic DNA. Translation: BAI29002.1.
RefSeqiYP_003220136.1. NC_013353.1.

Genome annotation databases

EnsemblBacteriaiBAI29002; BAI29002; ECO103_0124.
GeneIDi8474968.
KEGGieoh:ECO103_0124.
PATRICi32091779. VBIEscCol146794_0124.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010958 Genomic DNA. Translation: BAI29002.1.
RefSeqiYP_003220136.1. NC_013353.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi585395.ECO103_0124.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAI29002; BAI29002; ECO103_0124.
GeneIDi8474968.
KEGGieoh:ECO103_0124.
PATRICi32091779. VBIEscCol146794_0124.

Phylogenomic databases

eggNOGiCOG4993.
HOGENOMiHOG000116843.
KOiK00117.
OMAiDGDWPAY.
OrthoDBiEOG68Q0MR.

Enzyme and pathway databases

BioCyciECOL585395:GJA9-125-MONOMER.

Family and domain databases

Gene3Di2.140.10.10. 2 hits.
InterProiIPR017511. PQQ-dep_membr-bd_DH.
IPR018391. PQQ_beta_propeller_repeat.
IPR002372. PQQ_repeat.
IPR027295. Quinonprotein_ADH-like_fam.
IPR011047. Quinonprotein_ADH-like_supfam.
IPR001479. Quinoprotein_DH_CS.
[Graphical view]
PfamiPF01011. PQQ. 3 hits.
[Graphical view]
SMARTiSM00564. PQQ. 6 hits.
[Graphical view]
SUPFAMiSSF50998. SSF50998. 2 hits.
TIGRFAMsiTIGR03074. PQQ_membr_DH. 1 hit.
PROSITEiPS00363. BACTERIAL_PQQ_1. 1 hit.
PS00364. BACTERIAL_PQQ_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
    Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
    Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 12009 / EHECImported.

Entry informationi

Entry nameiC8U1J4_ECO10
AccessioniPrimary (citable) accession number: C8U1J4
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: January 7, 2015
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.