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C8TY92 (C8TY92_ECO10) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:nikA EMBL BAI32904.1
Ordered Locus Names:ECO103_4196 EMBL BAI32904.1
OrganismEscherichia coli O103:H2 (strain 12009 / EHEC) [Complete proteome] [HAMAP] EMBL BAI32904.1
Taxonomic identifier585395 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length524 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Sequences

Sequence LengthMass (Da)Tools
C8TY92 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 3E2F79E86C106662

FASTA52458,788
        10         20         30         40         50         60 
MLSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF AQSMVYEPLV 

        70         80         90        100        110        120 
KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP FDAEAAAENF RAVLDNRQRH 

       130        140        150        160        170        180 
AWLELANQIV DVKALSKTEL QITLKSAYYP FLQELALPRP FRFIAPSQFK NHETMNGIKA 

       190        200        210        220        230        240 
PIGTGPWILQ ESKLNQYDVF VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY 

       250        260        270        280        290        300 
GNEGLLPLDT FARFSQNPAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL 

       310        320        330        340        350        360 
IDNALYGTQQ VADTLFAPSV PYANLGLKPR QYDPQKAKAL LEKAGWTLPA GKDIREKNGQ 

       370        380        390        400        410        420 
PLRIELSFIG TDALSKSMAE IIQADMRQIG ADVSLIGEEE SSIYARQRDG RFGMIFHRTW 

       430        440        450        460        470        480 
GAPYDPHAFL SSMRVPSHAD FQAQQGLADK PLIDKEIGEV LATHDETQRQ ALYRDILTRL 

       490        500        510        520 
HDEAVYLPIS YISMMVVSKP ELGNIPYAPI ATEIPFEQIK PVKP 

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References

[1]"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 12009 / EHEC.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP010958 Genomic DNA. Translation: BAI32904.1.
RefSeqYP_003224038.1. NC_013353.1.

3D structure databases

ProteinModelPortalC8TY92.
SMRC8TY92. Positions 25-523.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING585395.ECO103_4196.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI32904; BAI32904; ECO103_4196.
GeneID8474597.
KEGGeoh:ECO103_4196.
PATRIC32100475. VBIEscCol146794_4385.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0747.
HOGENOMHOG000125740.
KOK15584.
OMAFRDFTES.
OrthoDBEOG6KHFZ2.

Enzyme and pathway databases

BioCycECOL585395:GJA9-4342-MONOMER.

Family and domain databases

InterProIPR011980. NikA_ABC_Ni-bd.
IPR000914. SBP_bac_5.
IPR023765. SBP_bac_5_CS.
[Graphical view]
PfamPF00496. SBP_bac_5. 1 hit.
[Graphical view]
TIGRFAMsTIGR02294. nickel_nikA. 1 hit.
PROSITEPS01040. SBP_BACTERIAL_5. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8TY92_ECO10
AccessionPrimary (citable) accession number: C8TY92
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 14, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)