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C8TY92

- C8TY92_ECO10

UniProt

C8TY92 - C8TY92_ECO10

Protein
Submitted name:

Periplasmic binding protein for nickel NikA

Gene

nikA

Organism
Escherichia coli O103:H2 (strain 12009 / EHEC)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (03 Nov 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. heme binding Source: InterPro
    2. nickel cation binding Source: InterPro
    3. transporter activity Source: InterPro

    GO - Biological processi

    1. nickel cation transport Source: InterPro

    Enzyme and pathway databases

    BioCyciECOL585395:GJA9-4342-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Periplasmic binding protein for nickel NikAImported
    Gene namesi
    Name:nikAImported
    Ordered Locus Names:ECO103_4196Imported
    OrganismiEscherichia coli O103:H2 (strain 12009 / EHEC)Imported
    Taxonomic identifieri585395 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000959: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi585395.ECO103_4196.

    Structurei

    3D structure databases

    ProteinModelPortaliC8TY92.
    SMRiC8TY92. Positions 25-523.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG0747.
    HOGENOMiHOG000125740.
    KOiK15584.
    OMAiFRDFTES.
    OrthoDBiEOG6KHFZ2.

    Family and domain databases

    InterProiIPR011980. NikA_ABC_Ni-bd.
    IPR000914. SBP_bac_5.
    IPR023765. SBP_bac_5_CS.
    [Graphical view]
    PfamiPF00496. SBP_bac_5. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02294. nickel_nikA. 1 hit.
    PROSITEiPS01040. SBP_BACTERIAL_5. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C8TY92-1 [UniParc]FASTAAdd to Basket

    « Hide

    MLSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF    50
    AQSMVYEPLV KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP 100
    FDAEAAAENF RAVLDNRQRH AWLELANQIV DVKALSKTEL QITLKSAYYP 150
    FLQELALPRP FRFIAPSQFK NHETMNGIKA PIGTGPWILQ ESKLNQYDVF 200
    VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY GNEGLLPLDT 250
    FARFSQNPAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL 300
    IDNALYGTQQ VADTLFAPSV PYANLGLKPR QYDPQKAKAL LEKAGWTLPA 350
    GKDIREKNGQ PLRIELSFIG TDALSKSMAE IIQADMRQIG ADVSLIGEEE 400
    SSIYARQRDG RFGMIFHRTW GAPYDPHAFL SSMRVPSHAD FQAQQGLADK 450
    PLIDKEIGEV LATHDETQRQ ALYRDILTRL HDEAVYLPIS YISMMVVSKP 500
    ELGNIPYAPI ATEIPFEQIK PVKP 524
    Length:524
    Mass (Da):58,788
    Last modified:November 3, 2009 - v1
    Checksum:i3E2F79E86C106662
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010958 Genomic DNA. Translation: BAI32904.1.
    RefSeqiYP_003224038.1. NC_013353.1.

    Genome annotation databases

    EnsemblBacteriaiBAI32904; BAI32904; ECO103_4196.
    GeneIDi8474597.
    KEGGieoh:ECO103_4196.
    PATRICi32100475. VBIEscCol146794_4385.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP010958 Genomic DNA. Translation: BAI32904.1 .
    RefSeqi YP_003224038.1. NC_013353.1.

    3D structure databases

    ProteinModelPortali C8TY92.
    SMRi C8TY92. Positions 25-523.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 585395.ECO103_4196.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAI32904 ; BAI32904 ; ECO103_4196 .
    GeneIDi 8474597.
    KEGGi eoh:ECO103_4196.
    PATRICi 32100475. VBIEscCol146794_4385.

    Phylogenomic databases

    eggNOGi COG0747.
    HOGENOMi HOG000125740.
    KOi K15584.
    OMAi FRDFTES.
    OrthoDBi EOG6KHFZ2.

    Enzyme and pathway databases

    BioCyci ECOL585395:GJA9-4342-MONOMER.

    Family and domain databases

    InterProi IPR011980. NikA_ABC_Ni-bd.
    IPR000914. SBP_bac_5.
    IPR023765. SBP_bac_5_CS.
    [Graphical view ]
    Pfami PF00496. SBP_bac_5. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02294. nickel_nikA. 1 hit.
    PROSITEi PS01040. SBP_BACTERIAL_5. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
      Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
      Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 12009 / EHECImported.

    Entry informationi

    Entry nameiC8TY92_ECO10
    AccessioniPrimary (citable) accession number: C8TY92
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 3, 2009
    Last sequence update: November 3, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3