C8TY92 (C8TY92_ECO10) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Periplasmic binding protein for nickel NikA EMBL BAI32904.1

Gene names

Name:	nikA EMBL BAI32904.1
Ordered Locus Names:	ECO103_4196 EMBL BAI32904.1

Organism

Escherichia coli O103:H2 (strain 12009 / EHEC) [Complete proteome] [HAMAP] EMBL BAI32904.1

Taxonomic identifier

585395 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli O103:H2

Protein attributes

Sequence length	524 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	nickel cation transport Inferred from electronic annotation. Source: InterPro
Molecular_function	heme binding Inferred from electronic annotation. Source: InterPro nickel cation binding Inferred from electronic annotation. Source: InterPro transporter activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8TY92 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: 3E2F79E86C106662	FASTA	524	58,788
	10 20 30 40 50 60 MLSTLRRTLF ALLACASFIV HAAAPDEITT AWPVNVGPLN PHLYTPNQMF AQSMVYEPLV 70 80 90 100 110 120 KYQADGSVIP WLAKSWTHSE DGKTWTFTLR DDVKFSNGEP FDAEAAAENF RAVLDNRQRH 130 140 150 160 170 180 AWLELANQIV DVKALSKTEL QITLKSAYYP FLQELALPRP FRFIAPSQFK NHETMNGIKA 190 200 210 220 230 240 PIGTGPWILQ ESKLNQYDVF VRNENYWGEK PAIKKITFNV IPDPTTRAVA FETGDIDLLY 250 260 270 280 290 300 GNEGLLPLDT FARFSQNPAY HTQLSQPIET VMLALNTAKA PTNELAVREA LNYAVNKKSL 310 320 330 340 350 360 IDNALYGTQQ VADTLFAPSV PYANLGLKPR QYDPQKAKAL LEKAGWTLPA GKDIREKNGQ 370 380 390 400 410 420 PLRIELSFIG TDALSKSMAE IIQADMRQIG ADVSLIGEEE SSIYARQRDG RFGMIFHRTW 430 440 450 460 470 480 GAPYDPHAFL SSMRVPSHAD FQAQQGLADK PLIDKEIGEV LATHDETQRQ ALYRDILTRL 490 500 510 520 HDEAVYLPIS YISMMVVSKP ELGNIPYAPI ATEIPFEQIK PVKP

References

[1]

"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli." Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T. Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12009 / EHEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010958 Genomic DNA. Translation: BAI32904.1.
RefSeq	YP_003224038.1. NC_013353.1.
3D structure databases
ProteinModelPortal	C8TY92.
SMR	C8TY92. Positions 25-523.
ModBase	Search...
Protein-protein interaction databases
STRING	585395.ECO103_4196.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAI32904; BAI32904; ECO103_4196.
GeneID	8474597.
KEGG	eoh:ECO103_4196.
PATRIC	32100475. VBIEscCol146794_4385.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0747.
HOGENOM	HOG000125740.
KO	K15584.
OMA	ELAFIGT.
ProtClustDB	CLSK880677.
Enzyme and pathway databases
BioCyc	ECOL585395:GJA9-4342-MONOMER.
Family and domain databases
InterPro	IPR011980. NikA_ABC_Ni-bd. IPR000914. SBP_bac_5. IPR023765. SBP_bac_5_CS. [Graphical view]
Pfam	PF00496. SBP_bac_5. 1 hit. [Graphical view]
TIGRFAMs	TIGR02294. nickel_nikA. 1 hit.
PROSITE	PS01040. SBP_BACTERIAL_5. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8TY92_ECO10

Accession

Primary (citable) accession number: C8TY92

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)