C8TXV7 (C8TXV7_ECO10) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
30S ribosomal protein S7 HAMAP-Rule MF_00480

Gene names

Name:	rpsG HAMAP-Rule MF_00480 EMBL BAI32769.1
Ordered Locus Names:	ECO103_4059 EMBL BAI32769.1

Organism

Escherichia coli O103:H2 (strain 12009 / EHEC) [Complete proteome] [HAMAP] EMBL BAI32769.1

Taxonomic identifier

585395 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Enterobacteriales › Enterobacteriaceae › Escherichia › Escherichia coli › Escherichia coli O103:H2

Protein attributes

Sequence length	156 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA By similarity. HAMAP-Rule MF_00480
Subunit structure	Part of the 30S ribosomal subunit. Contacts proteins S9 and S11 By similarity. HAMAP-Rule MF_00480
Sequence similarities	Belongs to the ribosomal protein S7P family. HAMAP-Rule MF_00480 RuleBase RU003619

Ontologies

Keywords
Ligand	RNA-binding rRNA-binding HAMAP-Rule MF_00480 RuleBase RU003620 tRNA-binding HAMAP-Rule MF_00480
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_00480 RuleBase RU003619
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	small ribosomal subunit Inferred from electronic annotation. Source: InterPro
Molecular_function	rRNA binding Inferred from electronic annotation. Source: HAMAP structural constituent of ribosome Inferred from electronic annotation. Source: InterPro tRNA binding Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8TXV7 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: D726CF17BA6EC571	FASTA	156	17,604
	10 20 30 40 50 60 MPRRRVIGQR KILPDPKFGS ELLAKFVNIL MVDGKKSTAE SIVYSALETL AQRSGKSELE 70 80 90 100 110 120 AFEVALENVR PTVEVKSRRV GGSTYQVPVE VRPVRRNALA MRWIVEAARK RGDKSMALRL 130 140 150 ANELSDAAEN KGTAVKKRED VHRMAEANKA FAHYRW

References

[1]

"Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli." Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T. Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: 12009 / EHEC.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AP010958 Genomic DNA. Translation: BAI32769.1.
RefSeq	YP_003223903.1. NC_013353.1.
3D structure databases
ProteinModelPortal	C8TXV7.
SMR	C8TXV7. Positions 2-152.
ModBase	Search...
Protein-protein interaction databases
STRING	585395.ECO103_4059.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	BAI32769; BAI32769; ECO103_4059.
GeneID	8475404.
KEGG	eoh:ECO103_4059.
PATRIC	32100191. VBIEscCol146794_4243.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0049.
HOGENOM	HOG000039067.
KO	K02992.
OMA	RREKTMT.
ProtClustDB	PRK05302.
Enzyme and pathway databases
BioCyc	ECOL585395:GJA9-4205-MONOMER.
Family and domain databases
Gene3D	1.10.455.10. 1 hit.
HAMAP	MF_00480_B. Ribosomal_S7_B.
InterPro	IPR000235. Ribosomal_S5/S7. IPR005717. Ribosomal_S7_bac/org-type. IPR020606. Ribosomal_S7_CS. IPR023798. Ribosomal_S7_dom. [Graphical view]
PANTHER	PTHR11205. PTHR11205. 1 hit. PTHR11205:SF13. PTHR11205:SF13. 1 hit.
Pfam	PF00177. Ribosomal_S7. 1 hit. [Graphical view]
PIRSF	PIRSF002122. RPS7p_RPS7a_RPS5e_RPS7o. 1 hit.
SUPFAM	SSF47973. Ribosomal_S7. 1 hit.
TIGRFAMs	TIGR01029. rpsG_bact. 1 hit.
PROSITE	PS00052. RIBOSOMAL_S7. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8TXV7_ECO10

Accession

Primary (citable) accession number: C8TXV7

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)