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Protein
Submitted name:

Histidine/lysine/arginine/ornithine transporter subunit HisM

Gene

hisM

Organism
Escherichia coli O26:H11 (strain 11368 / EHEC)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Biological processi

TransportUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciECOL573235:GCY7-3384-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Histidine/lysine/arginine/ornithine transporter subunit HisMImported
Gene namesi
Name:hisMImported
Ordered Locus Names:ECO26_3295Imported
OrganismiEscherichia coli O26:H11 (strain 11368 / EHEC)Imported
Taxonomic identifieri573235 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001617 Componenti: Chromosome

Subcellular locationi

  • Cell membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Cell membraneSAAS annotation, Membrane

Interactioni

Protein-protein interaction databases

STRINGi573235.ECO26_3295.

Structurei

3D structure databases

ProteinModelPortaliC8TUV2.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the binding-protein-dependent transport system permease family.UniRule annotation
Contains ABC transmembrane type-1 domain.SAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSAAS annotation

Phylogenomic databases

eggNOGiCOG4160.
HOGENOMiHOG000267552.
KOiK10015.
OrthoDBiEOG6MM1R5.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR010065. AA_ABC_transptr_permease_3TM.
IPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
TIGRFAMsiTIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8TUV2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIEILHEYWK PLLWTDGYRF TGVAITLWLL ILSVVIGGVL ALFLAIGRVS
60 70 80 90 100
SNKYIQFPIW LFTYIFRGTP LYVQLLVFYS GMYTLEIVKG TEFLNAFFRS
110 120 130 140 150
GLNCTVLALT LNTCAYTTEI FAGAIRSVPH GEIEAARAYG FSTFKMYRCI
160 170 180 190 200
ILPSALRIAL PAYSNEVILM LHSTALAFTA TVPDLLKIAR DINAATYQPF
210 220 230
TAFGIAAVLY LIISYVLISL FRRAEKRWLQ HVKPSSTH
Length:238
Mass (Da):26,870
Last modified:November 3, 2009 - v1
Checksum:i0307840A94836348
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010953 Genomic DNA. Translation: BAI26502.1.
RefSeqiWP_000569958.1. NC_013361.1.
YP_003230242.1. NC_013361.1.

Genome annotation databases

EnsemblBacteriaiBAI26502; BAI26502; ECO26_3295.
KEGGieoj:ECO26_3295.
PATRICi18402260. VBIEscCol24965_3365.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010953 Genomic DNA. Translation: BAI26502.1.
RefSeqiWP_000569958.1. NC_013361.1.
YP_003230242.1. NC_013361.1.

3D structure databases

ProteinModelPortaliC8TUV2.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi573235.ECO26_3295.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAI26502; BAI26502; ECO26_3295.
KEGGieoj:ECO26_3295.
PATRICi18402260. VBIEscCol24965_3365.

Phylogenomic databases

eggNOGiCOG4160.
HOGENOMiHOG000267552.
KOiK10015.
OrthoDBiEOG6MM1R5.

Enzyme and pathway databases

BioCyciECOL573235:GCY7-3384-MONOMER.

Family and domain databases

Gene3Di1.10.3720.10. 1 hit.
InterProiIPR010065. AA_ABC_transptr_permease_3TM.
IPR000515. MetI-like.
[Graphical view]
PfamiPF00528. BPD_transp_1. 1 hit.
[Graphical view]
SUPFAMiSSF161098. SSF161098. 1 hit.
TIGRFAMsiTIGR01726. HEQRo_perm_3TM. 1 hit.
PROSITEiPS50928. ABC_TM1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
    Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
    Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 11368 / EHECImported.

Entry informationi

Entry nameiC8TUV2_ECO26
AccessioniPrimary (citable) accession number: C8TUV2
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: May 27, 2015
This is version 40 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.