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Protein

Transcriptional regulatory protein

Gene

dcuR

Organism
Escherichia coli O26:H11 (strain 11368 / EHEC)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

ActivatorUniRule annotation

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation, Two-component regulatory systemUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationImported

Enzyme and pathway databases

BioCyciECOL573235:GCY7-5422-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Transcriptional regulatory proteinUniRule annotation
Gene namesi
Name:dcuRImported
Ordered Locus Names:ECO26_5236Imported
OrganismiEscherichia coli O26:H11 (strain 11368 / EHEC)Imported
Taxonomic identifieri573235 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
ProteomesiUP000001617 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliC8TN08.
SMRiC8TN08. Positions 4-115.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG4565.
HOGENOMiHOG000034816.
KOiK07703.
OrthoDBiEOG6T1WWP.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR024187. Sig_transdc_resp-reg_cit/mal.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFiPIRSF006171. RR_citrat_malat. 1 hit.
SMARTiSM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C8TN08-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINVLIIDDD AMVAELNRRY VAQIPGFQCC GTASTLEKAK EIIFNSDTPI
60 70 80 90 100
DLILLDIYMQ KENGLDLLPV LHNARCKSDV IVISSAADAA TIKDSLHYGV
110 120 130 140 150
VDYLIKPFQA SRFEEALTGW RQKKMALEKH QYYDQAELDQ LIHGSSSNEQ
160 170 180 190 200
DPRRLPKGLT PQTLRTLCQW IDAHQDYEFS TDELANEVNI SRVSCRKYLI
210 220 230
WLVNCHILFT SIHYGVTGRP VYRYRIQAEH YSLLKQYCQ
Length:239
Mass (Da):27,488
Last modified:November 3, 2009 - v1
Checksum:i4C111A0351F84FDA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010953 Genomic DNA. Translation: BAI28379.1.
RefSeqiWP_000611288.1. NC_013361.1.
YP_003232119.1. NC_013361.1.

Genome annotation databases

EnsemblBacteriaiBAI28379; BAI28379; ECO26_5236.
KEGGieoj:ECO26_5236.
PATRICi18406474. VBIEscCol24965_5406.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP010953 Genomic DNA. Translation: BAI28379.1.
RefSeqiWP_000611288.1. NC_013361.1.
YP_003232119.1. NC_013361.1.

3D structure databases

ProteinModelPortaliC8TN08.
SMRiC8TN08. Positions 4-115.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAI28379; BAI28379; ECO26_5236.
KEGGieoj:ECO26_5236.
PATRICi18406474. VBIEscCol24965_5406.

Phylogenomic databases

eggNOGiCOG4565.
HOGENOMiHOG000034816.
KOiK07703.
OrthoDBiEOG6T1WWP.

Enzyme and pathway databases

BioCyciECOL573235:GCY7-5422-MONOMER.

Family and domain databases

InterProiIPR011006. CheY-like_superfamily.
IPR024187. Sig_transdc_resp-reg_cit/mal.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00072. Response_reg. 1 hit.
[Graphical view]
PIRSFiPIRSF006171. RR_citrat_malat. 1 hit.
SMARTiSM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF52172. SSF52172. 1 hit.
PROSITEiPS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coli."
    Ogura Y., Ooka T., Iguchi A., Toh H., Asadulghani M., Oshima K., Kodama T., Abe H., Nakayama K., Kurokawa K., Tobe T., Hattori M., Hayashi T.
    Proc. Natl. Acad. Sci. U.S.A. 106:17939-17944(2009) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 11368 / EHECImported.

Entry informationi

Entry nameiC8TN08_ECO26
AccessioniPrimary (citable) accession number: C8TN08
Entry historyi
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: June 24, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.