C8NMB3 (C8NMB3_COREF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
D-alanine racemase EMBL EEW50253.1
EC=5.1.1.1 EMBL EEW50253.1

Gene names

Name:	alr2 EMBL EEW50253.1
Synonyms:	alr
ORF Names:	HMPREF0290_1138 EMBL EEW50253.1

Organism

Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395) EMBL EEW50253.1

Taxonomic identifier

196164 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Corynebacterineae › Corynebacteriaceae › Corynebacterium › Corynebacterium efficiens

Protein attributes

Sequence length	367 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. SAAS SAAS011079
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS011079
Molecular function	Isomerase SAAS SAAS011079 EMBL EEW50253.1
Gene Ontology (GO)
Biological_process	alanine metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8NMB3 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: B07005E2CF893D6A	FASTA	367	39,352
	10 20 30 40 50 60 MNLLTTRIDL DAIAHNTRLL KNRVGAAKLM AVVKADGYNH GMDRVAPVMA ANGADAFGVA 70 80 90 100 110 120 TIAEALALRA TGITTPILCW IWSPEQDWAA AVEAGIDLAV ISPRHARVLV DAPPTSRAIR 130 140 150 160 170 180 VSVKVDTALH RSGVDEQDWD AVFTLLRDCG HIEVTGLFTH LSCADEPGNP ETDHQAETFR 190 200 210 220 230 240 RAIDRARALG LEVPENHLCN SPATLTRPDL HMDMVRPGVA LYGLEPIPGL DHGLRPAMTW 250 260 270 280 290 300 AGAITVVKPI RKGEGTSYGL TWRAEADGFV AVVPAGYADG VPRAAQDHLR VHVNGHDYPQ 310 320 330 340 350 360 VGRVCMDQFV IFLGDNPHGV TAGDEAVIFG GTGMSATELA DALATINYEV ICRPTGRTVR DYTGEGK

References

[1]

Muzny D., Qin X., Deng J., Jiang H., Liu Y., Qu J., Song X.-Z., Zhang L., Thornton R., Coyle M., Francisco L., Jackson L., Javaid M., Korchina V., Kovar C., Mata R., Mathew T., Ngo R. , Nguyen L., Nguyen N., Okwuonu G., Ongeri F., Pham C., Simmons D., Wilczek-Boney K., Hale W., Jakkamsetti A., Pham P., Ruth R., San Lucas F., Warren J., Zhang J., Zhao Z., Zhou C., Zhu D., Lee S., Bess C., Blankenburg K., Forbes L., Fu Q., Gubbala S., Hirani K., Jayaseelan J.C., Lara F., Munidasa M., Palculict T., Patil S., Pu L.-L., Saada N., Tang L., Weissenberger G., Zhu Y., Hemphill L., Shang Y., Youmans B., Ayvaz T., Ross M., Santibanez J., Aqrawi P., Gross S., Joshi V., Fowler G., Nazareth L., Reid J., Worley K., Petrosino J., Highlander S., Gibbs R. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: YS-314 EMBL EEW50253.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ACLI01000057 Genomic DNA. Translation: EEW50253.1.
RefSeq	NP_737203.1. NC_004369.1.
3D structure databases
ProteinModelPortal	C8NMB3.
SMR	C8NMB3. Positions 1-362.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	1034900.
KEGG	cef:CE0593.
PATRIC	21487356. VBICorEff9312_0620.
Phylogenomic databases
eggNOG	COG0787.
KO	K01775.
OMA	NFKSIEI.
ProtClustDB	PRK00053.
Enzyme and pathway databases
BioCyc	CEFF196164:GJW8-606-MONOMER.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C8NMB3_COREF

Accession

Primary (citable) accession number: C8NMB3

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	April 3, 2013
This is version 30 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)