C8JSV8 (C8JSV8_LISMO) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Chitinase B EMBL EEW13238.1

Gene names

ORF Names:

LMIG_00385 EMBL EEW13238.1

Organism

Listeria monocytogenes FSL N3-165 EMBL EEW13238.1

Taxonomic identifier

393124 [NCBI]

Taxonomic lineage

Bacteria › Firmicutes › Bacillales › Listeriaceae › Listeria

Protein attributes

Sequence length	756 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 18 family. RuleBase RU004453 Contains 1 fibronectin type-III domain. RuleBase RU000718

Ontologies

Gene Ontology (GO)
Biological process	chitin catabolic process Inferred from electronic annotation. Source: InterPro
Cellular component	extracellular region Inferred from electronic annotation. Source: InterPro
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro cation binding Inferred from electronic annotation. Source: InterPro chitinase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C8JSV8 [UniParc]. Last modified November 3, 2009. Version 1. Checksum: EE3E0B9F8E94629B	FASTA	756	81,526
	10 20 30 40 50 60 MKKLFSITSV VLLVLSLVVV SIGAEPKRAK AAENVPQYRN VMYYGDWSIW GGEGNFYPKD 70 80 90 100 110 120 IPADQLTHLN FAFLDFNSNG DLVFTDKDAA VGAPVGQEGV QWGGANAGVL NAIQDLRAQN 130 140 150 160 170 180 PNLKIGVSVG GWSKSGDFST VAADPTKRAN FVKNVMKFVK YTNMDFVDLD WEYPASVRDA 190 200 210 220 230 240 DLVDNKNDEG TPNAKPADKQ NFITLLQDLR TALDKQGVDI NKKYELSVAL PAAKSTLENG 250 260 270 280 290 300 IDVANLFKVV DFANVMTYDL NGAWTPNSAH HTALYGNPKD PNYDSGFSVD QTVKYLKEKG 310 320 330 340 350 360 AVSNKIVVGA AFYTRGWNKV AAGTDTALPG LFQAAEKTNK DADGSLTYGA NNENPIKTGD 370 380 390 400 410 420 GGRAGGVWAY RSIDALKAKT PTLKEYWDDT AKAPYLYSKE TGEFYTYDNT RSIGYKAQYV 430 440 450 460 470 480 KDNNLGGMIS WMQSQDKTTT STKRDELTKA IKTGLFGTSA IPQNAITYAN LNVVATVKPY 490 500 510 520 530 540 SENGVGYEIT ITNNEKADET NEVLKSTELS FETVKLPKFY IPVKAGETLT AGDYKAGTVT 550 560 570 580 590 600 TSGGNTVVDL ASVYDAQQIP QGASYTFRLK SSASSVDVAN ISKIDLTQRM VKSSVEFGKQ 610 620 630 640 650 660 TIFGGGTVVP DPSDTEAPTV PKALASSNVT DKSATLTWTA STDNKAVAGY KVYRNGTEVG 670 680 690 700 710 720 SVSGTTFTDS GLTAKTAYTY TVKAYDAAGN FSAASSALTV TTLDAATPPA TPAWDAAKTY 730 740 750 NKGDRVSYKG KTYEAQWWTQ GNEPGAEQWG PWLLIN

References

[1]

"The genome sequence of Listeria monocytogenes strain FSL N3-165." The Broad Institute Genome Sequencing Platform Borowsky M., Young S., Jaffe D., Gnerre S., Berlin A., Heiman D., Hepburn T., Sykes S., Alvarado L., Kodira C.D., Wiedmann M., Swaminathan B., Lauer P., Portnoy D., Cossart P., Buchrieser C., Higgins D., Lander E. , Galagan J., Nusbaum C., Birren B. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: FSL N3-165 EMBL EEW13238.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AARQ02000002 Genomic DNA. Translation: EEW13238.1.
3D structure databases
ProteinModelPortal	C8JSV8.
SMR	C8JSV8. Positions 617-702.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
PATRIC	27510921. VBILisMon53965_0729.
Phylogenomic databases
OMA	YGANNEN.
Family and domain databases
InterPro	IPR003610. CBM_fam5/12. IPR011583. Chitinase_II. IPR003961. Fibronectin_type3. IPR001223. Glyco_hydro18cat. IPR013781. Glyco_hydro_subgr_catalytic. IPR017853. Glycoside_hydrolase_SF. IPR013783. Ig-like_fold. [Graphical view]
Gene3D	G3DSA:2.10.10.20. G3DSA:2.10.10.20. 1 hit. G3DSA:3.20.20.80. Glyco_hydro_cat. 2 hits. G3DSA:2.60.40.10. Ig-like_fold. 1 hit.
Pfam	PF02839. CBM_5_12. 1 hit. PF00041. fn3. 1 hit. PF00704. Glyco_hydro_18. 1 hit. [Graphical view]
SMART	SM00495. ChtBD3. 1 hit. SM00060. FN3. 1 hit. SM00636. Glyco_18. 1 hit. [Graphical view]
SUPFAM	SSF51055. CBM_5_12. 1 hit. SSF49265. FN_III-like. 1 hit. SSF51445. Glyco_hydro_cat. 1 hit.
PROSITE	PS50853. FN3. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C8JSV8_LISMO

Accession

Primary (citable) accession number: C8JSV8

Entry history

Integrated into UniProtKB/TrEMBL:	November 3, 2009
Last sequence update:	November 3, 2009
Last modified:	December 14, 2011
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)