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C8JS20 (C8JS20_LISMO) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:LMIG_00517 EMBL EEW12950.1
OrganismListeria monocytogenes FSL N3-165 EMBL EEW12950.1
Taxonomic identifier393124 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacillalesListeriaceaeListeria

Protein attributes

Sequence length160 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the dihydrofolate reductase family. RuleBase RU004474

Sequences

Sequence LengthMass (Da)Tools
C8JS20 [UniParc].

Last modified November 3, 2009. Version 1.
Checksum: 6F362686413A4ACB

FASTA16018,418
        10         20         30         40         50         60 
MIIFVWAQDR AGNIGKDNKM PWHLPGDLQF FKKTTTGKTL VMGRKTYESL GKALPNRKTI 

        70         80         90        100        110        120 
VLTRDQGLKL DDAEILHSKE AVLALAETGE PIYIVGGAEI YRLFMDVADQ LIVTKIDAEF 

       130        140        150        160 
EADTAFPEVD WENFSEVAKE FHEKDEKNKY NYTFYTYERN 

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References

[1]"The genome sequence of Listeria monocytogenes strain FSL N3-165."
The Broad Institute Genome Sequencing Platform
Borowsky M., Young S., Jaffe D., Gnerre S., Berlin A., Heiman D., Hepburn T., Sykes S., Alvarado L., Kodira C.D., Wiedmann M., Swaminathan B., Lauer P., Portnoy D., Cossart P., Buchrieser C., Higgins D., Lander E. expand/collapse author list , Galagan J., Nusbaum C., Birren B.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: FSL N3-165 EMBL EEW12950.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AARQ02000001 Genomic DNA. Translation: EEW12950.1.

3D structure databases

ProteinModelPortalC8JS20.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

PATRIC27510334. VBILisMon53965_0438.

Phylogenomic databases

OMAQDEEGVI.

Family and domain databases

InterProIPR012259. DHFR.
IPR024072. DHFR-like_dom.
IPR001796. DHFR_dom.
[Graphical view]
Gene3DG3DSA:3.40.430.10. G3DSA:3.40.430.10. 1 hit.
PANTHERPTHR11549:SF1. DHFR. 1 hit.
PfamPF00186. DHFR_1. 1 hit.
[Graphical view]
PIRSFPIRSF000194. DHFR. 1 hit.
PRINTSPR00070. DHFR.
SUPFAMSSF53597. SSF53597. 1 hit.
PROSITEPS51330. DHFR_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC8JS20_LISMO
AccessionPrimary (citable) accession number: C8JS20
Entry history
Integrated into UniProtKB/TrEMBL: November 3, 2009
Last sequence update: November 3, 2009
Last modified: January 25, 2012
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)