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Protein
Submitted name:

Polyprotein

Gene
N/A
Organism
Coxsackievirus A16
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).SAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionHydrolaseSAAS annotation, Nucleotidyltransferase, RNA-directed RNA polymeraseSAAS annotation, Transferase
Biological processViral RNA replicationSAAS annotation
LigandATP-bindingSAAS annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Submitted name:
PolyproteinImported
OrganismiCoxsackievirus A16Imported
Taxonomic identifieri31704 [NCBI]
Taxonomic lineageiVirusesssRNA virusesssRNA positive-strand viruses, no DNA stagePicornaviralesPicornaviridaeEnterovirusEnterovirus A

Structurei

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3SJ8X-ray2.20A1-183[»]
3SJ9X-ray2.40A1-183[»]
3SJIX-ray1.80A1-183[»]
ProteinModelPortaliC8CIL7
SMRiC8CIL7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini410 – 526RdRp catalyticInterPro annotationAdd BLAST117

Family and domain databases

InterProiView protein in InterPro
IPR000199 Peptidase_C3A/C3B_picornavir
IPR009003 Peptidase_S1_PA
IPR001205 RNA-dir_pol_C
IPR007094 RNA-dir_pol_PSvirus
PfamiView protein in Pfam
PF00548 Peptidase_C3, 1 hit
PF00680 RdRP_1, 1 hit
SUPFAMiSSF50494 SSF50494, 1 hit
PROSITEiView protein in PROSITE
PS50507 RDRP_SSRNA_POS, 1 hit

Sequencei

Sequence statusi: Fragment.

C8CIL7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
GPSLDFALSL LRRNIRQVQT DQGHFTMLGV RDRLAILPRH SQPGKTIWVE
60 70 80 90 100
HKLINVLDAV ELVDEQGVNL ELTLVTLDTN EKFRDVTKFI PETITGASDA
110 120 130 140 150
TLIINTEHMP SMFVPVGDVV QYGFLNLSGK PTHRTMMYNF PTKAGQCGGV
160 170 180 190 200
VTSVGKIIGI HIGGNGRQGF CAGLKRGYFA SEQGEIQWMK SNKETGRLNI
210 220 230 240 250
NGPTRTKLEP SAFYDVFEGS KEPAVLTSKD PRLEVDFEQA LFSKYVGNTL
260 270 280 290 300
HEPDEYVTQA ALHYANQLKQ LDININKMSM EEACYGTEYL EAINLHTSAG
310 320 330 340 350
YPYSALGVKK SDILDPTTRD TTKMKFYMDK YGLDLPYSTY VKDELRSLDK
360 370 380 390 400
IKKGKSRLIE ASSLNDSVYL RMTFGHLYET FHANPGTVTG SAVGCNPDVF
410 420 430 440 450
WSKLPILLPG SLFAFDYSGY DASLSPVWFR ALEVVLREIG YSEEAVSLIE
460 470 480 490 500
GINHTHHVYR NRTYCVLGGM PSGCSGTSIF NSMINNIIIR TLLIKTFKGI
510 520 530 540 550
DLDELNMVAY GDDVLASYPF PIDCSELAKT GKEYGLTMTP ADKSPCFNGV
560 570 580 590 600
TWENATFLKR GFLPDHQFPF LIHPTMPMRE IHESIRWTKD ARNTQDHVRS
610 620 630 640
LCLLAWHNGK EEYEKFVSTI RSVPVGKALA IPNFENLRRN WLELF
Length:645
Mass (Da):72,477
Last modified:October 13, 2009 - v1
Checksum:i7CB783B17C8D1E25
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei645Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GQ406341 Genomic RNA Translation: ACV33372.1

Similar proteinsi

Entry informationi

Entry nameiC8CIL7_9ENTO
AccessioniPrimary (citable) accession number: C8CIL7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 25, 2018
This is version 57 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

3D-structureCombined sources

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