C8CHS6 (C8CHS6_RAT) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Mitochondrial superoxide dismutase 2 EMBL ACV32533.1

Gene names

Name:

Sod2 RGD 3732

Organism

Rattus norvegicus (Rat) EMBL ACV32533.1

Taxonomic identifier

10116 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Deuterostomia › Chordata › Craniata › Vertebrata › Gnathostomata › Teleostomi › Euteleostomi › Sarcopterygii › Tetrapoda › Amniota › Mammalia › Theria › Eutheria › Euarchontoglires › Glires › Rodentia › Sciurognathi › Muroidea › Muridae › Murinae › Rattus

Protein attributes

Sequence length	72 AA.
Sequence status	Fragment.
Protein existence	Evidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the iron/manganese superoxide dismutase family. RuleBase RU004477

Ontologies

Gene Ontology (GO)
Biological_process	age-dependent response to reactive oxygen species Inferred from electronic annotation. Source: Compara detection of oxygen Inferred from electronic annotation. Source: Compara erythrophore differentiation Inferred from electronic annotation. Source: Compara glutathione metabolic process Inferred from electronic annotation. Source: Compara heart development Inferred from electronic annotation. Source: Compara hemopoiesis Inferred from electronic annotation. Source: Compara iron ion homeostasis Inferred from electronic annotation. Source: Compara liver development Inferred from electronic annotation. Source: Compara locomotory behavior Inferred from electronic annotation. Source: Compara negative regulation of fat cell differentiation Inferred from electronic annotation. Source: Compara negative regulation of fibroblast proliferation Inferred from electronic annotation. Source: Compara negative regulation of neuron apoptotic process Inferred from electronic annotation. Source: Compara neuron development Inferred from electronic annotation. Source: Compara oxygen homeostasis Inferred from electronic annotation. Source: Compara positive regulation of nitric oxide biosynthetic process Inferred from electronic annotation. Source: Compara post-embryonic development Inferred from electronic annotation. Source: Compara protein homotetramerization Inferred from electronic annotation. Source: Compara regulation of catalytic activity Inferred from electronic annotation. Source: Compara regulation of mitochondrial membrane potential Inferred from electronic annotation. Source: Compara release of cytochrome c from mitochondria Inferred from electronic annotation. Source: Compara removal of superoxide radicals Inferred from electronic annotation. Source: Compara respiratory electron transport chain Inferred from electronic annotation. Source: Compara response to activity Inferred from electronic annotation. Source: Compara response to axon injury Inferred from electronic annotation. Source: Compara response to gamma radiation Inferred from electronic annotation. Source: Compara response to hydrogen peroxide Inferred from electronic annotation. Source: Compara response to hyperoxia Inferred from electronic annotation. Source: Compara superoxide anion generation Inferred from electronic annotation. Source: Compara vasodilation by acetylcholine involved in regulation of systemic arterial blood pressure Inferred from electronic annotation. Source: Compara
Cellular_component	mitochondrial inner membrane Inferred from electronic annotation. Source: Compara
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro superoxide dismutase activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Experimental info
	Non-terminal residue	72	1	EMBL ACV32533.1

Sequences

	Sequence		Length	Mass (Da)
	C8CHS6 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 0A7BCC5B21AF1DCD	FASTA	72	7,988
	10 20 30 40 50 60 MLCRAACSAG RRLGPAASTA GSRHKHSLPD LPYDYGALEP HINAQIMQLH HSKHHATYVN 70 NLNVTEEKYH EA

References

[1]	Rana T., Das S., Bera A.K., Pan D., De S., Sikdar S., Bandyopadhyay S., Bhattacharya D., Das S.K. Submitted (JUL-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: W EMBL ACV32533.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	GQ404503 mRNA. Translation: ACV32533.1.
IPI	IPI00211593.
UniGene	Rn.10488.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	10116.ENSRNOP00000025794.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Organism-specific databases
RGD	3732. Sod2.
Gene expression databases
ArrayExpress	C8CHS6.
Family and domain databases
InterPro	IPR001189. Mn/Fe_SOD. IPR019831. Mn/Fe_SOD_N. [Graphical view]
PANTHER	PTHR11404. PTHR11404. 1 hit.
Pfam	PF00081. Sod_Fe_N. 1 hit. [Graphical view]
PRINTS	PR01703. MNSODISMTASE.
SUPFAM	SSF46609. SODismutase. 1 hit.
ProtoNet	Search...
Other
NextBio	35565364.

Entry information

Entry name

C8CHS6_RAT

Accession

Primary (citable) accession number: C8CHS6

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 29, 2013
This is version 24 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)