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Protein

DNA ligase

Gene

NECHADRAFT_37641

Organism
Nectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) (Fusarium solani subsp. pisi)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

ATP + (deoxyribonucleotide)(n) + (deoxyribonucleotide)(m) = AMP + diphosphate + (deoxyribonucleotide)(n+m).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseUniRule annotation

Keywords - Biological processi

DNA damage, DNA recombinationUniRule annotation, DNA repairUniRule annotation, DNA replicationUniRule annotation

Keywords - Ligandi

ATP-bindingUniRule annotation, Nucleotide-binding

Names & Taxonomyi

Protein namesi
Recommended name:
DNA ligaseUniRule annotation (EC:6.5.1.1UniRule annotation)
Gene namesi
ORF Names:NECHADRAFT_37641Imported
OrganismiNectria haematococca (strain 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVI) (Fusarium solani subsp. pisi)Imported
Taxonomic identifieri660122 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaSordariomycetesHypocreomycetidaeHypocrealesNectriaceaeFusariumFusarium solani species complex
ProteomesiUP000005206 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi140110.NechaP37641.

Family & Domainsi

Sequence similaritiesi

Belongs to the ATP-dependent DNA ligase family.UniRule annotation

Phylogenomic databases

InParanoidiC7YPB7.
KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7YPB7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPSPTKKRKL NNGTQSAAPT RGLEYFFSKQ RQHGSASNKT PETETKNETT
60 70 80 90 100
RDAPENLTDE ELARKLQAEW DQEVANERQA NQTGTRSTPS EQNESKSRDE
110 120 130 140 150
SPAASELKPP KALPTMPKPS ASGDPKKPTL GLQSAGMAED TISTSIPLDE
160 170 180 190 200
SPLTFEPSKY IPQLKEHWAS EGGNASYALL TRCFVLISGT TSRIKIVDTL
210 220 230 240 250
VNCLRVLIEG DPTSLLPAVW LATNSISPPY ISLELGLGGS AISKALRNVC
260 270 280 290 300
GLDSKSLKAI YDKHGDAGDV AFEAKRKQSF TLRKPKPLTI KAVYQSLVKI
310 320 330 340 350
ANSQGQGSGE AKQRLVDRLL QDARGGEESR FIVRTLCQHL RIGAVKTTML
360 370 380 390 400
IALSRAFLLS RPPEADFPIR SASELSKLKK EELAEIWGRG EELVKACFAR
410 420 430 440 450
RPNYDDLVPV LLEIGISEEL LIRCGIALHI PLRPMLGSIT RDLAEMLTKL
460 470 480 490 500
QGRDFACEYK YDGQRAQIHC DEHGKSTIFS RHLELMTDKY PDLVELMPKI
510 520 530 540 550
RGEGVDSFIM EGEVVAVDQA TGELKNFQTL TNRARKDVAI GSITIDVCLF
560 570 580 590 600
SFDLMYLNGQ PLLDRPFRER RELLRSLFKE VPHHFTWVKS LDATSADSES
610 620 630 640 650
VLDFFKSATE NKCEGIMVKI LDNLPALPYV GDAEEQEPEK AEKPAPKAKA
660 670 680 690 700
KGKAKSKNTP GENGGETKTK SRRKPLLATY EPDKRLDSWL KVKKDYSSSF
710 720 730 740 750
DTLDLIPVAA WHGQGRKSKW WSPILMACRN EETGALEAVC KCMSGFTDAF
760 770 780 790 800
YKANREFYDD GEESEEPKNT RSQQPSFVEY SGPRPDVWFE PQEVWEMAFA
810 820 830 840 850
DITLSPTYTA AIGLVSEERG LSLRFPRFLK KREDKSLEEA STNDVLAGLF
860 870
RKQEAKASST KENKNGGEEV EEADEVEE
Length:878
Mass (Da):97,782
Last modified:October 13, 2009 - v1
Checksum:i42AA5761FD42A0F1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG698898 Genomic DNA. Translation: EEU45817.1.
RefSeqiXP_003051530.1. XM_003051484.1.

Genome annotation databases

EnsemblFungiiNechaT37641; NechaP37641; NechaG37641.
GeneIDi9673136.
KEGGinhe:NECHADRAFT_37641.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
GG698898 Genomic DNA. Translation: EEU45817.1.
RefSeqiXP_003051530.1. XM_003051484.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi140110.NechaP37641.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblFungiiNechaT37641; NechaP37641; NechaG37641.
GeneIDi9673136.
KEGGinhe:NECHADRAFT_37641.

Phylogenomic databases

InParanoidiC7YPB7.
KOiK10747.
OrthoDBiEOG7TXKRG.

Family and domain databases

Gene3Di1.10.3260.10. 1 hit.
2.40.50.140. 1 hit.
InterProiIPR000977. DNA_ligase_ATP-dep.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR00574. dnl1. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 77-13-4 / ATCC MYA-4622 / FGSC 9596 / MPVIImported.

Entry informationi

Entry nameiC7YPB7_NECH7
AccessioniPrimary (citable) accession number: C7YPB7
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: June 24, 2015
This is version 37 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.