C7TN60 (C7TN60_LACRL) Unreviewed, UniProtKB/TrEMBL
Last modified
May 1, 2013.
Version 30.
History...
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Argininosuccinate synthase HAMAP-Rule MF_00005 EC=6.3.4.5 HAMAP-Rule MF_00005 Alternative name(s): Citrulline--aspartate ligase HAMAP-Rule MF_00005 | ||||
| Gene names |
| ||||
| Organism | Lactobacillus rhamnosus (strain Lc 705) [Complete proteome] [HAMAP] EMBL CAR91644.1 | ||||
| Taxonomic identifier | 568704 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus › ![]() |
Protein attributes
| Sequence length | 406 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Catalytic activity | ATP + L-citrulline + L-aspartate = AMP + diphosphate + N(omega)-(L-arginino)succinate. HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Pathway | Amino-acid biosynthesis; L-arginine biosynthesis; L-arginine from L-ornithine and carbamoyl phosphate: step 2/3. HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Subunit structure | Homotetramer By similarity. HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Subcellular location | Cytoplasm By similarity HAMAP-Rule MF_00005 SAAS SAAS018223. |
| Sequence similarities | Belongs to the argininosuccinate synthase family. Type 1 subfamily. HAMAP-Rule MF_00005 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Amino-acid biosynthesis Arginine biosynthesis HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Cellular component | Cytoplasm HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Ligand | ATP-binding HAMAP-Rule MF_00005 SAAS SAAS018223 Nucleotide-binding |
| Molecular function | Ligase HAMAP-Rule MF_00005 SAAS SAAS018223 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological_process | arginine biosynthetic process Inferred from electronic annotation. Source: HAMAP |
| Cellular_component | cytoplasm Inferred from electronic annotation. Source: UniProtKB-SubCell |
| Molecular_function | ATP binding Inferred from electronic annotation. Source: HAMAP argininosuccinate synthase activityInferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequence annotation (Features)
| Feature key | Position(s) | Length | Description | Graphical view | Feature identifier | ||||
Regions | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| Nucleotide binding | 8 – 16 | 9 | ATP By similarity HAMAP-Rule MF_00005 | ||||||
Sites | |||||||||
| Binding site | 86 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 116 | 1 | ATP; via amide nitrogen By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 118 | 1 | Aspartate By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 122 | 1 | Aspartate By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 122 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 123 | 1 | Aspartate By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 126 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 174 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 259 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
| Binding site | 271 | 1 | Citrulline By similarity HAMAP-Rule MF_00005 | ||||||
Sequences
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References
| [1] | "Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein." Kankainen M., Paulin L., Tynkkynen S., von Ossowski I., Reunanen J., Partanen P., Satokari R., Vesterlund S., Hendrickx A.P.A., Lebeer S., De Keersmaecker S.C.J., Vanderleyden J., Hamalinen T., Laukkanen S., Salovuori N., Ritari J., Alatalo E., Korpela R. de Vos W.M.Proc. Natl. Acad. Sci. U.S.A. 106:17193-17198(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Lc 705 EMBL CAR91644.1. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | FM179323 Genomic DNA. Translation: CAR91644.1. |
| RefSeq | YP_003175495.1. NC_013199.1. |
3D structure databases | |
| ProteinModelPortal | C7TN60. |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | 568704.LC705_02805. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| EnsemblBacteria | CAR91644; CAR91644; LC705_02805. |
| GeneID | 8432833. |
| KEGG | lrl:LC705_02805. |
| PATRIC | 22272438. VBILacRha58455_2602. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| eggNOG | COG0137. |
| HOGENOM | HOG000230093. |
| KO | K01940. |
| OMA | NDQFRFE. |
| ProtClustDB | PRK00509. |
Enzyme and pathway databases | |
| BioCyc | LRHA568704:GHIC-1433-MONOMER. |
| UniPathway | UPA00068; UER00113. |
Family and domain databases | |
| Gene3D | 3.40.50.620. 1 hit. 3.90.1260.10. 1 hit. |
| HAMAP | MF_00005. Arg_succ_synth_type1. |
| InterPro | IPR001518. Arginosuc_synth. IPR018223. Arginosuc_synth_CS. IPR023434. Arginosuc_synth_type_1_subfam. IPR024074. AS_cat/multimer_dom_body. IPR014729. Rossmann-like_a/b/a_fold. [Graphical view] |
| PANTHER | PTHR11587. PTHR11587. 1 hit. |
| Pfam | PF00764. Arginosuc_synth. 1 hit. [Graphical view] |
| TIGRFAMs | TIGR00032. argG. 1 hit. |
| PROSITE | PS00564. ARGININOSUCCIN_SYN_1. 1 hit. PS00565. ARGININOSUCCIN_SYN_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C7TN60_LACRL | ||||||||
| Accession | Primary (citable) accession number: C7TN60 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

Clusters with
