C7TM67 (C7TM67_LACRL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
50S ribosomal protein L17 HAMAP-Rule MF_01368 RuleBase RU000661

Gene names

Name:	rplQ HAMAP-Rule MF_01368 EMBL CAR91301.1
Ordered Locus Names:	LC705_02462 EMBL CAR91301.1

Organism

Lactobacillus rhamnosus (strain Lc 705) [Complete proteome] [HAMAP] EMBL CAR91301.1

Taxonomic identifier

568704 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Firmicutes › Bacilli › Lactobacillales › Lactobacillaceae › Lactobacillus › Lactobacillus rhamnosus

Protein attributes

Sequence length	126 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Subunit structure	Part of the 50S ribosomal subunit. Contacts protein L32 By similarity. HAMAP-Rule MF_01368
Sequence similarities	Belongs to the ribosomal protein L17P family. HAMAP-Rule MF_01368 RuleBase RU000660

Ontologies

Keywords
Molecular function	Ribonucleoprotein Ribosomal protein HAMAP-Rule MF_01368 RuleBase RU000660 EMBL CAR91301.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	translation Inferred from electronic annotation. Source: HAMAP
Cellular_component	ribosome Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	structural constituent of ribosome Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7TM67 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: B413BC92BC9D7C6C	FASTA	126	14,161
	10 20 30 40 50 60 MSYRKLGRTS SQRKAMLRDL TTDLLINERI VTTEARAKEV RSTAEKMITL GKRGDLHARR 70 80 90 100 110 120 QAAAYVRNEI ASVEEQEDSV IVKSALQKLF SDLAPKYADR KGGYTRILKT APRRGDGAPM VIIELV

References

[1]

"Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein." Kankainen M., Paulin L., Tynkkynen S., von Ossowski I., Reunanen J., Partanen P., Satokari R., Vesterlund S., Hendrickx A.P.A., Lebeer S., De Keersmaecker S.C.J., Vanderleyden J., Hamalinen T., Laukkanen S., Salovuori N., Ritari J., Alatalo E., Korpela R. , Mattila-Sandholm T., Lassig A., Hatakka K., Kinnunen K.T., Karjalainen H., Saxelin M., Laakso K., Surakka A., Palva A., SalusjArvi T., Auvinen P., de Vos W.M. Proc. Natl. Acad. Sci. U.S.A. 106:17193-17198(2009) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Lc 705 EMBL CAR91301.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FM179323 Genomic DNA. Translation: CAR91301.1.
RefSeq	YP_003175152.1. NC_013199.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	568704.LC705_02462.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CAR91301; CAR91301; LC705_02462.
GeneID	8432549.
KEGG	lrl:LC705_02462.
PATRIC	22271765. VBILacRha58455_2280.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0203.
HOGENOM	HOG000019780.
KO	K02879.
OMA	LIMNERI.
ProtClustDB	PRK05591.
Enzyme and pathway databases
BioCyc	LRHA568704:GHIC-2523-MONOMER.
Family and domain databases
Gene3D	3.90.1030.10. 1 hit.
HAMAP	MF_01368. Ribosomal_L17.
InterPro	IPR000456. Ribosomal_L17. [Graphical view]
PANTHER	PTHR14413. PTHR14413. 1 hit.
Pfam	PF01196. Ribosomal_L17. 1 hit. [Graphical view]
SUPFAM	SSF64263. Ribosomal_L17. 1 hit.
TIGRFAMs	TIGR00059. L17. 1 hit.
PROSITE	PS01167. RIBOSOMAL_L17. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7TM67_LACRL

Accession

Primary (citable) accession number: C7TM67

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 23 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)