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C7TB64 (C7TB64_LACRG) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 22. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

ABC transporter, Na efflux transporter permease component EMBL CAR86857.1
Gene names
Name:natB EMBL CAR86857.1
Ordered Locus Names:LGG_00962, LRHM_0919 EMBL BAI41446.1
OrganismLactobacillus rhamnosus (strain ATCC 53103 / GG) [Complete proteome] [HAMAP]
Taxonomic identifier568703 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus

Protein attributes

Sequence length419 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
C7TB64 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: D4B6E1B018AD2412

FASTA41945,153
        10         20         30         40         50         60 
MHKFWVVMSQ VYKKNVKSGS WIFLVLSPLL FLAIGVGIAF YVAKTQAPAQ VAVVSDVSAV 

        70         80         90        100        110        120 
GQALSKQSTD DLKFKVYSSD KKANAALNDE KIDGVLTVKA ADHFRSHYVA RDNGQTVDTS 

       130        140        150        160        170        180 
TLVTALSGLK LSSTAASMHL TPAQVTALTQ PPVVTSKTVA IEDGKQVPKS DSTQLMNHGV 

       190        200        210        220        230        240 
AVVSMVLILM VTMVYGSILA QEIATEKGSR IMEILLSSVS ATTQFFGKLA GIFALLLTQL 

       250        260        270        280        290        300 
AIYLVAGLIG WQFLKNQSMV AGVLKQFDFS ILFSGTTGMI AIFFVIGTLT FSVLAALTGS 

       310        320        330        340        350        360 
LVSNQEQVQQ AAMPISMLGL VGYFITIAAQ SGDSMLAQIA SYVPFLNVFV MPTQMSLGRA 

       370        380        390        400        410 
SMGEAWISIA ISIAFLALFT MFTVKVYRNN VLVYSGSGLW QSMKTSFSIW KSERHVVKR 

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References

[1]"Complete genome sequence of the probiotic Lactobacillus rhamnosus ATCC 53103."
Morita H., Toh H., Oshima K., Murakami M., Taylor T.D., Igimi S., Hattori M.
J. Bacteriol. 191:7630-7631(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 53103 EMBL BAI41446.1 and ATCC 53103 / GG [Tokyo].
[2]"Comparative genomic analysis of Lactobacillus rhamnosus GG reveals pili containing a human- mucus binding protein."
Kankainen M., Paulin L., Tynkkynen S., von Ossowski I., Reunanen J., Partanen P., Satokari R., Vesterlund S., Hendrickx A.P.A., Lebeer S., De Keersmaecker S.C.J., Vanderleyden J., Hamalinen T., Laukkanen S., Salovuori N., Ritari J., Alatalo E., Korpela R. expand/collapse author list , Mattila-Sandholm T., Lassig A., Hatakka K., Kinnunen K.T., Karjalainen H., Saxelin M., Laakso K., Surakka A., Palva A., SalusjArvi T., Auvinen P., de Vos W.M.
Proc. Natl. Acad. Sci. U.S.A. 106:17193-17198(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 53103 / GG [Helsinki].

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP011548 Genomic DNA. Translation: BAI41446.1.
FM179322 Genomic DNA. Translation: CAR86857.1.
RefSeqYP_003170708.1. NC_013198.1.
YP_005865411.1. NC_017482.1.

3D structure databases

ModBaseSearch...

Protein-protein interaction databases

STRING568703.LGG_00962.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAI41446; BAI41446; LRHM_0919.
CAR86857; CAR86857; LGG_00962.
GeneID12474034.
8423322.
KEGGlrg:LRHM_0919.
lrh:LGG_00962.
PATRIC22263227. VBILacRha2892_0898.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1668.
HOGENOMHOG000055808.
KOK01992.
OMAANEWIEM.
ProtClustDBCLSK778624.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameC7TB64_LACRG
AccessionPrimary (citable) accession number: C7TB64
Secondary accession number(s): C8USU2
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)