C7RND4 (C7RND4_ACCPU) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACV37320.1

Gene names

Ordered Locus Names:

CAP2UW1_4078 EMBL ACV37320.1

Organism

Accumulibacter phosphatis (strain UW-1) [Complete proteome] [HAMAP] EMBL ACV37320.1

Taxonomic identifier

522306 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Betaproteobacteria › unclassified Betaproteobacteria › Candidatus Accumulibacter › Candidatus Accumulibacter phosphatis

Protein attributes

Sequence length	280 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Predicted

Ontologies

Keywords
Domain	Signal EMBL ACV37320.1
Molecular function	Ligase EMBL ACV37320.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 25	25	Potential EMBL ACV37320.1
	Chain	26 – 280	255	Potential		PRO_5000513873

Sequences

	Sequence		Length	Mass (Da)
	C7RND4 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 6DAB3A94C685B2E9	FASTA	280	31,014
	10 20 30 40 50 60 MRWNGVVNAL TLVALAGGGW PVLGEPLPLL LAETEQGQAD VRLYLVSEKL DGVRAFWDGQ 70 80 90 100 110 120 RLLTRSGHAI AAPEWFVAGF PRQALDGELW IGRGEFERLS GIVRRQTADE AAWRDVRYLV 130 140 150 160 170 180 FELPQAPGTF RQRARALHEL VSSAGVPWLR AVEQIEIGSR QALERKLDEV VLAGGEGLML 190 200 210 220 230 240 HRADAAYVTG RSDALLKLKR WLDAEATVIG HQPGRGKYAG MLGALRVRTA GGVEFMLGTG 250 260 270 280 LSDALRRDPP PIGTQITFRY RELTDQGRPR FASFQRLRDL

References

[1]

"Complete sequence of chromosome of Candidatus Accumulibacter phosphatis clade IIA str. UW-1." US DOE Joint Genome Institute Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K., He S., Salamov A., Szeto E., Dalin E., Pangilinan J.L., Lapidus A., Lowry S., Kyrpides N.C., McMahon K.D., Hugenholtz P. Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: UW-1 EMBL ACV37320.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001715 Genomic DNA. Translation: ACV37320.1.
RefSeq	YP_003169249.1. NC_013194.1.
3D structure databases
ProteinModelPortal	C7RND4.
ModBase	Search...
Protein-protein interaction databases
STRING	522306.CAP2UW1_4078.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV37320; ACV37320; CAP2UW1_4078.
GeneID	8406255.
KEGG	app:CAP2UW1_4078.
PATRIC	21264468. VBICanAcc132554_4455.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000293070.
KO	K01971.
ProtClustDB	PRK09125.
Enzyme and pathway databases
BioCyc	APHO522306:GHXL-4120-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7RND4_ACCPU

Accession

Primary (citable) accession number: C7RND4

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 25 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)