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C7RND4

- C7RND4_ACCPU

UniProt

C7RND4 - C7RND4_ACCPU

Protein
Submitted name:

ATP dependent DNA ligase

Gene

CAP2UW1_4078

Organism
Accumulibacter phosphatis (strain UW-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 33 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciAPHO522306:GHXL-4120-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:CAP2UW1_4078Imported
    OrganismiAccumulibacter phosphatis (strain UW-1)Imported
    Taxonomic identifieri522306 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaCandidatus Accumulibacter
    ProteomesiUP000001619: Chromosome

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Signal peptidei1 – 2525 PotentialImportedAdd
    BLAST
    Chaini26 – 280255 PotentialImportedPRO_5000513873Add
    BLAST

    Interactioni

    Protein-protein interaction databases

    STRINGi522306.CAP2UW1_4078.

    Structurei

    3D structure databases

    ProteinModelPortaliC7RND4.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Keywords - Domaini

    SignalImported

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000293070.
    KOiK01971.
    OrthoDBiEOG60919Q.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    C7RND4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRWNGVVNAL TLVALAGGGW PVLGEPLPLL LAETEQGQAD VRLYLVSEKL    50
    DGVRAFWDGQ RLLTRSGHAI AAPEWFVAGF PRQALDGELW IGRGEFERLS 100
    GIVRRQTADE AAWRDVRYLV FELPQAPGTF RQRARALHEL VSSAGVPWLR 150
    AVEQIEIGSR QALERKLDEV VLAGGEGLML HRADAAYVTG RSDALLKLKR 200
    WLDAEATVIG HQPGRGKYAG MLGALRVRTA GGVEFMLGTG LSDALRRDPP 250
    PIGTQITFRY RELTDQGRPR FASFQRLRDL 280
    Length:280
    Mass (Da):31,014
    Last modified:October 13, 2009 - v1
    Checksum:i6DAB3A94C685B2E9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001715 Genomic DNA. Translation: ACV37320.1.
    RefSeqiWP_015768486.1. NC_013194.1.
    YP_003169249.1. NC_013194.1.

    Genome annotation databases

    EnsemblBacteriaiACV37320; ACV37320; CAP2UW1_4078.
    GeneIDi8406255.
    KEGGiapp:CAP2UW1_4078.
    PATRICi21264468. VBICanAcc132554_4455.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001715 Genomic DNA. Translation: ACV37320.1 .
    RefSeqi WP_015768486.1. NC_013194.1.
    YP_003169249.1. NC_013194.1.

    3D structure databases

    ProteinModelPortali C7RND4.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 522306.CAP2UW1_4078.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACV37320 ; ACV37320 ; CAP2UW1_4078 .
    GeneIDi 8406255.
    KEGGi app:CAP2UW1_4078.
    PATRICi 21264468. VBICanAcc132554_4455.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000293070.
    KOi K01971.
    OrthoDBi EOG60919Q.

    Enzyme and pathway databases

    BioCyci APHO522306:GHXL-4120-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete sequence of chromosome of Candidatus Accumulibacter phosphatis clade IIA str. UW-1."
      US DOE Joint Genome Institute
      Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K., He S., Salamov A., Szeto E., Dalin E., Pangilinan J.L., Lapidus A., Lowry S., Kyrpides N.C., McMahon K.D., Hugenholtz P.
      Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: UW-1Imported.

    Entry informationi

    Entry nameiC7RND4_ACCPU
    AccessioniPrimary (citable) accession number: C7RND4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 33 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3