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C7RND4

- C7RND4_ACCPU

UniProt

C7RND4 - C7RND4_ACCPU

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

CAP2UW1_4078

Organism
Accumulibacter phosphatis (strain UW-1)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAPHO522306:GHXL-4120-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:CAP2UW1_4078Imported
OrganismiAccumulibacter phosphatis (strain UW-1)Imported
Taxonomic identifieri522306 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaCandidatus Accumulibacter
ProteomesiUP000001619: Chromosome

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2525 PotentialImportedAdd
BLAST
Chaini26 – 280255 PotentialImportedPRO_5000513873Add
BLAST

Interactioni

Protein-protein interaction databases

STRINGi522306.CAP2UW1_4078.

Structurei

3D structure databases

ProteinModelPortaliC7RND4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

SignalImported

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000293070.
KOiK01971.
OrthoDBiEOG60919Q.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

C7RND4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MRWNGVVNAL TLVALAGGGW PVLGEPLPLL LAETEQGQAD VRLYLVSEKL
60 70 80 90 100
DGVRAFWDGQ RLLTRSGHAI AAPEWFVAGF PRQALDGELW IGRGEFERLS
110 120 130 140 150
GIVRRQTADE AAWRDVRYLV FELPQAPGTF RQRARALHEL VSSAGVPWLR
160 170 180 190 200
AVEQIEIGSR QALERKLDEV VLAGGEGLML HRADAAYVTG RSDALLKLKR
210 220 230 240 250
WLDAEATVIG HQPGRGKYAG MLGALRVRTA GGVEFMLGTG LSDALRRDPP
260 270 280
PIGTQITFRY RELTDQGRPR FASFQRLRDL
Length:280
Mass (Da):31,014
Last modified:October 13, 2009 - v1
Checksum:i6DAB3A94C685B2E9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001715 Genomic DNA. Translation: ACV37320.1.
RefSeqiYP_003169249.1. NC_013194.1.

Genome annotation databases

EnsemblBacteriaiACV37320; ACV37320; CAP2UW1_4078.
GeneIDi8406255.
KEGGiapp:CAP2UW1_4078.
PATRICi21264468. VBICanAcc132554_4455.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001715 Genomic DNA. Translation: ACV37320.1 .
RefSeqi YP_003169249.1. NC_013194.1.

3D structure databases

ProteinModelPortali C7RND4.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 522306.CAP2UW1_4078.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACV37320 ; ACV37320 ; CAP2UW1_4078 .
GeneIDi 8406255.
KEGGi app:CAP2UW1_4078.
PATRICi 21264468. VBICanAcc132554_4455.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000293070.
KOi K01971.
OrthoDBi EOG60919Q.

Enzyme and pathway databases

BioCyci APHO522306:GHXL-4120-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete sequence of chromosome of Candidatus Accumulibacter phosphatis clade IIA str. UW-1."
    US DOE Joint Genome Institute
    Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K., He S., Salamov A., Szeto E., Dalin E., Pangilinan J.L., Lapidus A., Lowry S., Kyrpides N.C., McMahon K.D., Hugenholtz P.
    Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: UW-1Imported.

Entry informationi

Entry nameiC7RND4_ACCPU
AccessioniPrimary (citable) accession number: C7RND4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: October 29, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3