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C7RND4 (C7RND4_ACCPU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 31. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:CAP2UW1_4078 EMBL ACV37320.1
OrganismAccumulibacter phosphatis (strain UW-1) [Complete proteome] [HAMAP] EMBL ACV37320.1
Taxonomic identifier522306 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaCandidatus Accumulibacter

Protein attributes

Sequence length280 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existencePredicted

Ontologies

Keywords
   DomainSignal EMBL ACV37320.1
   Molecular functionLigase EMBL ACV37320.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 2525 Potential EMBL ACV37320.1
Chain26 – 280255 Potential EMBL ACV37320.1
PRO_5000513873

Sequences

Sequence LengthMass (Da)Tools
C7RND4 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 6DAB3A94C685B2E9

FASTA28031,014
        10         20         30         40         50         60 
MRWNGVVNAL TLVALAGGGW PVLGEPLPLL LAETEQGQAD VRLYLVSEKL DGVRAFWDGQ 

        70         80         90        100        110        120 
RLLTRSGHAI AAPEWFVAGF PRQALDGELW IGRGEFERLS GIVRRQTADE AAWRDVRYLV 

       130        140        150        160        170        180 
FELPQAPGTF RQRARALHEL VSSAGVPWLR AVEQIEIGSR QALERKLDEV VLAGGEGLML 

       190        200        210        220        230        240 
HRADAAYVTG RSDALLKLKR WLDAEATVIG HQPGRGKYAG MLGALRVRTA GGVEFMLGTG 

       250        260        270        280 
LSDALRRDPP PIGTQITFRY RELTDQGRPR FASFQRLRDL 

« Hide

References

[1]"Complete sequence of chromosome of Candidatus Accumulibacter phosphatis clade IIA str. UW-1."
US DOE Joint Genome Institute
Martin H.G., Ivanova N., Kunin V., Warnecke F., Barry K., He S., Salamov A., Szeto E., Dalin E., Pangilinan J.L., Lapidus A., Lowry S., Kyrpides N.C., McMahon K.D., Hugenholtz P.
Submitted (SEP-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: UW-1 EMBL ACV37320.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001715 Genomic DNA. Translation: ACV37320.1.
RefSeqYP_003169249.1. NC_013194.1.

3D structure databases

ProteinModelPortalC7RND4.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING522306.CAP2UW1_4078.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV37320; ACV37320; CAP2UW1_4078.
GeneID8406255.
KEGGapp:CAP2UW1_4078.
PATRIC21264468. VBICanAcc132554_4455.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1793.
HOGENOMHOG000293070.
KOK01971.
OrthoDBEOG60919Q.

Enzyme and pathway databases

BioCycAPHO522306:GHXL-4120-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7RND4_ACCPU
AccessionPrimary (citable) accession number: C7RND4
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: June 11, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)