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Protein
Submitted name:

ATP dependent DNA ligase

Gene

CAP2UW1_4078

Organism
Accumulibacter phosphatis (strain UW-1)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciAPHO522306:GHXL-4120-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:CAP2UW1_4078Imported
OrganismiAccumulibacter phosphatis (strain UW-1)Imported
Taxonomic identifieri522306 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaBetaproteobacteriaCandidatus Accumulibacter
Proteomesi
  • UP000001619 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi522306.CAP2UW1_4078.

Structurei

3D structure databases

ProteinModelPortaliC7RND4.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini213 – 27866DNA_ligase_OB_2InterPro annotationAdd
BLAST

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiPOG091H05UG.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

C7RND4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRWNGVVNAL TLVALAGGGW PVLGEPLPLL LAETEQGQAD VRLYLVSEKL
60 70 80 90 100
DGVRAFWDGQ RLLTRSGHAI AAPEWFVAGF PRQALDGELW IGRGEFERLS
110 120 130 140 150
GIVRRQTADE AAWRDVRYLV FELPQAPGTF RQRARALHEL VSSAGVPWLR
160 170 180 190 200
AVEQIEIGSR QALERKLDEV VLAGGEGLML HRADAAYVTG RSDALLKLKR
210 220 230 240 250
WLDAEATVIG HQPGRGKYAG MLGALRVRTA GGVEFMLGTG LSDALRRDPP
260 270 280
PIGTQITFRY RELTDQGRPR FASFQRLRDL
Length:280
Mass (Da):31,014
Last modified:October 13, 2009 - v1
Checksum:i6DAB3A94C685B2E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001715 Genomic DNA. Translation: ACV37320.1.
RefSeqiWP_015768486.1. NC_013194.1.

Genome annotation databases

EnsemblBacteriaiACV37320; ACV37320; CAP2UW1_4078.
KEGGiapp:CAP2UW1_4078.
PATRICi21264468. VBICanAcc132554_4455.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001715 Genomic DNA. Translation: ACV37320.1.
RefSeqiWP_015768486.1. NC_013194.1.

3D structure databases

ProteinModelPortaliC7RND4.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi522306.CAP2UW1_4078.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV37320; ACV37320; CAP2UW1_4078.
KEGGiapp:CAP2UW1_4078.
PATRICi21264468. VBICanAcc132554_4455.

Phylogenomic databases

eggNOGiENOG4105E1T. Bacteria.
COG1793. LUCA.
HOGENOMiHOG000293070.
KOiK10747.
OMAiVRGYWDG.
OrthoDBiPOG091H05UG.

Enzyme and pathway databases

BioCyciAPHO522306:GHXL-4120-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiC7RND4_ACCPU
AccessioniPrimary (citable) accession number: C7RND4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: September 7, 2016
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.