C7R2H6 (C7R2H6_JONDD) Unreviewed, UniProtKB/TrEMBL
Last modified
December 14, 2011.
Version 16.
History...
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
Names·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize orderNames and origin
| Protein names | Recommended name: Glutamate racemase HAMAP MF_00258 EC=5.1.1.3 HAMAP MF_00258 | ||||
| Gene names |
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| Organism | Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans) [Complete proteome] [HAMAP] | ||||
| Taxonomic identifier | 471856 [NCBI] | ||||
| Taxonomic lineage | Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Jonesiaceae › Jonesia |
Protein attributes
| Sequence length | 268 AA. |
| Sequence status | Complete. |
| Protein existence | Inferred from homology |
General annotation (Comments)
| Function | Provides the (R)-glutamate required for cell wall biosynthesis By similarity. HAMAP MF_00258 SAAS SAAS015942 |
| Catalytic activity | L-glutamate = D-glutamate. HAMAP MF_00258 SAAS SAAS015942 |
| Pathway | Cell wall biogenesis; peptidoglycan biosynthesis. HAMAP MF_00258 SAAS SAAS015942 |
| Sequence similarities | Belongs to the aspartate/glutamate racemases family. HAMAP MF_00258 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Cell shape Cell wall biogenesis/degradation HAMAP MF_00258 SAAS SAAS015942 Peptidoglycan synthesis HAMAP MF_00258 SAAS SAAS015942 |
| Molecular function | Isomerase HAMAP MF_00258 SAAS SAAS015942 EMBL ACV08547.1 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW peptidoglycan biosynthetic processInferred from electronic annotation. Source: HAMAP regulation of cell shapeInferred from electronic annotation. Source: UniProtKB-KW |
| Molecular function | glutamate racemase activity Inferred from electronic annotation. Source: HAMAP |
| Complete GO annotation... | |
Sequences
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References
| [1] | "Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134)." Pukall R., Gehrich-Schroter G., Lapidus A., Nolan M., Glavina Del Rio T., Lucas S., Chen F., Tice H., Pitluck S., Cheng J.F., Copeland A., Saunders E., Brettin T., Detter J.C., Bruce D., Goodwin L., Pati A., Ivanova N. Han C.Stand. Genomic Sci. 1:262-269(2009) [PubMed: 21304666] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 14870 / DSM 20603 / CIP 55134. |
Cross-references
Sequence databases | |
|---|---|
| EMBL GenBank DDBJ | CP001706 Genomic DNA. Translation: ACV08547.1. |
| RefSeq | YP_003160850.1. NC_013174.1. |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| STRING | C7R2H6. |
Protocols and materials databases | |
| StructuralBiologyKnowledgebase | Search... |
Genome annotation databases | |
| GeneID | 8380068. |
| GenomeReviews | Gene locus Jden_0885 in contig CP001706_GR. |
| KEGG | jde:Jden_0885. |
| PATRIC | 22161842. VBIJonDen9837_0924. |
Organism-specific databases | |
| CMR | Search... |
Phylogenomic databases | |
| OMA | PQEDTIY. |
| ProtClustDB | CLSK2818613. |
Family and domain databases | |
| HAMAP | MF_00258. Glu_racemase. [Tree] |
| InterPro | IPR015942. Asp/Glu/hydantoin_racemase. IPR001920. Asp/Glu_race. IPR018187. Asp/Glu_racemase_AS. IPR004391. Glu_race. [Graphical view] |
| Gene3D | G3DSA:3.40.50.1860. Asp/Glu_race. 1 hit. |
| KO | K01776. |
| PANTHER | PTHR21198. PTHR21198. 1 hit. |
| Pfam | PF01177. Asp_Glu_race. 1 hit. [Graphical view] |
| SUPFAM | SSF53681. Asp/Glu_race. 2 hits. |
| TIGRFAMs | TIGR00067. Glut_race. 1 hit. |
| PROSITE | PS00923. ASP_GLU_RACEMASE_1. 1 hit. PS00924. ASP_GLU_RACEMASE_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | C7R2H6_JONDD | ||||||||
| Accession | Primary (citable) accession number: C7R2H6 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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