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C7R2C3 (C7R2C3_JONDD) Unreviewed, UniProtKB/TrEMBL

Last modified December 14, 2011. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Deoxyribose-phosphate aldolase HAMAP MF_00114
Short name=DERA HAMAP MF_00114
EC=4.1.2.4 HAMAP MF_00114
Alternative name(s):
2-deoxy-D-ribose 5-phosphate aldolase HAMAP MF_00114
Phosphodeoxyriboaldolase HAMAP MF_00114
Gene names
Name:deoC HAMAP MF_00114
Ordered Locus Names:Jden_0832
OrganismJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans) [Complete proteome] [HAMAP]
Taxonomic identifier471856 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Jonesiaceae › Jonesia

Protein attributes

Sequence length236 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5-phosphate By similarity. HAMAP MF_00114 SAAS SAAS022979

Catalytic activity

2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde. HAMAP MF_00114 SAAS SAAS022979

Pathway

Carbohydrate degradation; 2-deoxy-D-ribose 1-phosphate degradation; D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-alpha-D-ribose 1-phosphate: step 2/2. HAMAP MF_00114 SAAS SAAS022979

Subcellular location

Cytoplasm By similarity HAMAP MF_00114 SAAS SAAS022979.

Sequence similarities

Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. HAMAP MF_00114

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1571Schiff-base intermediate with acetaldehyde By similarity HAMAP MF_00114
Active site1871 By similarity HAMAP MF_00114

Sequences

Sequence LengthMass (Da)Tools
C7R2C3 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 18AE94D21298ED75

FASTA23623,883
        10         20         30         40         50         60 
MPEKVTAASV ASMVDHTLLK PESTPADVAA LIDEAVSLGV FSICVSPSLL PVKIPEGSEL 

        70         80         90        100        110        120 
KVATVVGFPS GAHHPEVKAA ETARAVTDGA HEIDMVINLG AVKSGDWELV ERDIRAVRDA 

       130        140        150        160        170        180 
APAPVVLKVI IESAALTDEE IVAACEASER AGADFVKTST GFHSTGGASV HAVRLMAHTV 

       190        200        210        220        230 
GQRLGVKASG GIRTGDAALA MISAGATRLG LSGTAAVLDG VENPDTAVES GDGSGY

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001706 Genomic DNA. Translation: ACV08494.1.
RefSeqYP_003160797.1. NC_013174.1.

3D structure databases

ProteinModelPortalC7R2C3.
ModBaseSearch...

Protein-protein interaction databases

STRINGC7R2C3.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8380015.
GenomeReviewsGene locus Jden_0832 in contig CP001706_GR.
KEGGjde:Jden_0832.
PATRIC22161728. VBIJonDen9837_0867.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAIDHTNLK.
ProtClustDBCLSK2818607.

Family and domain databases

HAMAPMF_00114. DeoC_type1.
[Tree]
InterProIPR013785. Aldolase_TIM.
IPR011343. DeoC.
IPR002915. DeoC/AroFGH_arch.
IPR022979. Deoxyribose_phosphate_aldo_1.
[Graphical view]
Gene3DG3DSA:3.20.20.70. Aldolase_TIM. 1 hit.
KOK01619.
PANTHERPTHR10889. DeoC. 1 hit.
PfamPF01791. DeoC. 1 hit.
[Graphical view]
PIRSFPIRSF001357. DeoC. 1 hit.
TIGRFAMsTIGR00126. DeoC. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7R2C3_JONDD
AccessionPrimary (citable) accession number: C7R2C3
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: December 14, 2011
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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