SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

C7R071

- C7R071_JONDD

UniProt

C7R071 - C7R071_JONDD

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Xylose isomerase
Gene
xylA, Jden_0466
Organism
Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei51 – 511 By similarityUniRule annotation
Active sitei54 – 541 By similarityUniRule annotation
Metal bindingi178 – 1781Magnesium 1 By similarityUniRule annotation
Metal bindingi214 – 2141Magnesium 1 By similarityUniRule annotation
Metal bindingi214 – 2141Magnesium 2 By similarityUniRule annotation
Metal bindingi217 – 2171Magnesium 2 By similarityUniRule annotation
Metal bindingi242 – 2421Magnesium 1 By similarityUniRule annotation
Metal bindingi252 – 2521Magnesium 2 By similarityUniRule annotation
Metal bindingi254 – 2541Magnesium 2 By similarityUniRule annotation
Metal bindingi292 – 2921Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotation, Metal-bindingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciJDEN471856:GH77-479-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
Ordered Locus Names:Jden_0466Imported
OrganismiJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans)Imported
Taxonomic identifieri471856 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicrococcineaeJonesiaceaeJonesia
ProteomesiUP000000628: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotation

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotation

Protein-protein interaction databases

STRINGi471856.Jden_0466.

Structurei

3D structure databases

ProteinModelPortaliC7R071.

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

eggNOGiCOG2115.
HOGENOMiHOG000022596.
KOiK01805.
OMAiDLIPIDA.
OrthoDBiEOG62NX4R.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02631. xylA_Arthro. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7R071-1 [UniParc]FASTAAdd to Basket

« Hide

MTQQDIKYSF GLWTTGWQGR DQFGDATRAF RSPADDVRKL AELGAWGFTF    50
HDDDVVPFGS DDATRAKLLG EVKDAAQETG LTIEMVTTNL FSHPVFKDGG 100
VTSNDRSVRR FALRKVLRNV DLTAELGAKT FVMWGGREGS EYDGAKDLHA 150
ALERYKEGVD LIAGYIKEKG YDIKIALEPK PNEPRGDIFL PTVGHALGFI 200
AELEHGDIVG LNPETGHEQM AGLNYTHGLA QALWADKLFH IDLNGQRSIK 250
FDQDLVFGHG DLLSAFFTVD LVENGFPASP DAPRYTGPRH FDYKPSRTEA 300
VEGVWDSAKA NMETYNLLAA KAKAYREDPE VKAAMEQAGL FELATPTLAA 350
GESVADLLAD TSAFEDFDAD AAAERSFGFV RLNQLAIKHL IG 392
Length:392
Mass (Da):43,081
Last modified:October 13, 2009 - v1
Checksum:i04EE3A1706D36B36
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001706 Genomic DNA. Translation: ACV08130.1.
RefSeqiYP_003160433.1. NC_013174.1.

Genome annotation databases

EnsemblBacteriaiACV08130; ACV08130; Jden_0466.
GeneIDi8379651.
KEGGijde:Jden_0466.
PATRICi22160940. VBIJonDen9837_0483.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001706 Genomic DNA. Translation: ACV08130.1 .
RefSeqi YP_003160433.1. NC_013174.1.

3D structure databases

ProteinModelPortali C7R071.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 471856.Jden_0466.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACV08130 ; ACV08130 ; Jden_0466 .
GeneIDi 8379651.
KEGGi jde:Jden_0466.
PATRICi 22160940. VBIJonDen9837_0483.

Phylogenomic databases

eggNOGi COG2115.
HOGENOMi HOG000022596.
KOi K01805.
OMAi DLIPIDA.
OrthoDBi EOG62NX4R.

Enzyme and pathway databases

BioCyci JDEN471856:GH77-479-MONOMER.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013453. XylA_actinobac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02631. xylA_Arthro. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 14870 / DSM 20603 / CIP 55134.

Entry informationi

Entry nameiC7R071_JONDD
AccessioniPrimary (citable) accession number: C7R071
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: June 11, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi