C7QZF1 (C7QZF1_JONDD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
2-oxoglutarate dehydrogenase, E1 subunit EMBL ACV09449.1

Gene names

Ordered Locus Names:

Jden_1806

Organism

Jonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans) [Complete proteome] [HAMAP]

Taxonomic identifier

471856 [NCBI]

Taxonomic lineage

Bacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Jonesiaceae › Jonesia

Protein attributes

Sequence length	1258 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the 2-oxoacid dehydrogenase family. RuleBase RU003423

Ontologies

Keywords
Ligand	Thiamine pyrophosphate SAAS SAAS001017
Technical term	Complete proteome
Gene Ontology (GO)
Biological process	tricarboxylic acid cycle Inferred from electronic annotation. Source: InterPro
Molecular function	oxoglutarate dehydrogenase (succinyl-transferring) activity Inferred from electronic annotation. Source: InterPro thiamine pyrophosphate binding Inferred from electronic annotation. Source: InterPro transferase activity, transferring acyl groups Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7QZF1 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 62E686388E6DCF23	FASTA	1,258	138,543
	10 20 30 40 50 60 MKVGEPNVSS NAESTSIGTS NTDFGANEWL VDEIREQYLA NPDSVAPEWR EYFASATPAP 70 80 90 100 110 120 ATTPTTPAPA PRESQAERET RKQHQAATVS TPEPTSAPSP ERPVATAQPA TAPYAAQAKR 130 140 150 160 170 180 ASKVVNDDTP DNIERLKGPA ARLIKNMETS LEVPTATSVR AIPAKLMVDN RIVINNHLVR 190 200 210 220 230 240 TRGGKVSFTH LIGFALVEAL ADMPAMNAGY LEQDGKPAAV YPAHVNIGLA IDIQKPDGTR 250 260 270 280 290 300 QLLVPAIKKA DTMDFAQFVS AYEDVVRRAR QGKLDITDFQ GVTVSLTNPG TIGTVHSVPR 310 320 330 340 350 360 LMKGQGAIIG VGAMDYPAEF AGASTEQLSR MGVSKVLTLT STYDHRIIQG AQSGDFLRII 370 380 390 400 410 420 ATKLLGEDGF YDRVFQALRI PYEPVRWVRD NTINADAEAE KPARIAELIH SYRSRGHLMA 430 440 450 460 470 480 DTDPLAYRQR RHTDLDIQTH GLTLWDLDRV FPVHGFSGRS KMSLRDILGI LRDSYCRTVG 490 500 510 520 530 540 IEYMHIADRD QRAWFQERLE NPYERTPREE QLRILRRLNA AEAFETFLQT KFVGQKRFSL 550 560 570 580 590 600 EGGESIIPML DAILSSAAEG GLDEVSIGMA HRGRLNVLAN IAGKSYGQIF AEFEGNLDQR 610 620 630 640 650 660 TYQGSGDVKY HLGTEGTFTA ESGATTKVSL AANPSHLEAV NPVLEGIVRA KQDRIDLGGD 670 680 690 700 710 720 GFSVLPILVH GDAAFAGQGV VMEVLNLSQL RGYRTGGTIH LIINNQVGFT TGPSNSRSTH 730 740 750 760 770 780 YATDVAKGYQ VPVFHVNGDD PEAVVRIARL AFDYRERFNQ DVIIDMVCYR RRGHNEGDDP 790 800 810 820 830 840 SMTQPLMYNL IEAKNSVRKL YTETLASRGD ISDEEAAEAL QDYQNQLERV FTETREGGFV 850 860 870 880 890 900 PPADTEPVAG LERPESQRED AGTMVGWQTA VPQSVLDRIG DAHINPPAGF TVHTKLRQLL 910 920 930 940 950 960 DKRHKMVSEG GIDWGYAEIL AFGSLLMEGT PVRLAGQDSR RGTFVQRHAV LHDRNTGAEW 970 980 990 1000 1010 1020 TPLLYLSADQ AKFWVYDSSL SEYACLGFEY GYSVERPDAL VLWEAQFGDF VNGAQTVIDE 1030 1040 1050 1060 1070 1080 FISSAEQKWS QNSSVVLLLP HGYEGQGPDH SSARIERFLQ LCAENNMTIA YPSTPAQYFH 1090 1100 1110 1120 1130 1140 LLRHQAYARP RRPLVVMTPK SMLRLKAAAS TPADFTSGTF RHVIGDDAAA ARAAQGGTID 1150 1160 1170 1180 1190 1200 RVVVSTGKIS WELLAHAKKT HDTSTAFVRL EQLYPLDGDQ LREALAPFGD AEVVWVQEEP 1210 1220 1230 1240 1250 ENQGAWPFLA LNLPQLIEGR SLRVIARPAS ASPAVGIAKV HKAEQDSLIQ RAFDRDNT

References

[1]

"Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134)." Pukall R., Gehrich-Schroter G., Lapidus A., Nolan M., Glavina Del Rio T., Lucas S., Chen F., Tice H., Pitluck S., Cheng J.F., Copeland A., Saunders E., Brettin T., Detter J.C., Bruce D., Goodwin L., Pati A., Ivanova N. , Mavromatis K., Ovchinnikova G., Chen A., Palaniappan K., Land M., Hauser L., Chang Y.J., Jeffries C.D., Chain P., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P., Han C. Stand. Genomic Sci. 1:262-269(2009) [PubMed: 21304666] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 14870 / DSM 20603 / CIP 55134.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001706 Genomic DNA. Translation: ACV09449.1.
RefSeq	YP_003161752.1. NC_013174.1.
3D structure databases
ProteinModelPortal	C7QZF1.
ModBase	Search...
Protein-protein interaction databases
STRING	C7QZF1.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8380970.
GenomeReviews	Gene locus Jden_1806 in contig CP001706_GR.
KEGG	jde:Jden_1806.
PATRIC	22163833. VBIJonDen9837_1889.
Organism-specific databases
CMR	Search...
Phylogenomic databases
OMA	EGDEPAF.
ProtClustDB	PRK12270.
Family and domain databases
InterPro	IPR001078. 2-oxoacid_DH_actylTfrase. IPR011603. 2oxoglutarate_DH_E1. IPR023213. CAT-like_dom. IPR001017. DH_E1. IPR005475. Transketolase-like_Pyr-bd. [Graphical view]
Gene3D	G3DSA:3.30.559.10. CAT-like_dom. 1 hit.
KO	K00164.
PANTHER	PTHR23152. 2oxoglutarate_DH_E1. 1 hit.
Pfam	PF00198. 2-oxoacid_dh. 1 hit. PF00676. E1_dh. 1 hit. PF02779. Transket_pyr. 1 hit. [Graphical view]
PIRSF	PIRSF000157. Oxoglu_dh_E1. 1 hit.
SMART	SM00861. Transket_pyr. 1 hit. [Graphical view]
TIGRFAMs	TIGR00239. 2oxo_dh_E1. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7QZF1_JONDD

Accession

Primary (citable) accession number: C7QZF1

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	December 14, 2011
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)