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C7QZD8 (C7QZD8_JONDD) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Arginine--tRNA ligase HAMAP MF_00123
EC=6.1.1.19 HAMAP MF_00123
Alternative name(s):
Arginyl-tRNA synthetase HAMAP MF_00123
Gene names
Name:argS HAMAP MF_00123
Ordered Locus Names:Jden_1793
OrganismJonesia denitrificans (strain ATCC 14870 / DSM 20603 / CIP 55134) (Listeria denitrificans) [Complete proteome] [HAMAP]
Taxonomic identifier471856 [NCBI]
Taxonomic lineageBacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Micrococcineae › Jonesiaceae › Jonesia

Protein attributes

Sequence length558 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg). HAMAP MF_00123

Subunit structure

Monomer By similarity. HAMAP MF_00123

Subcellular location

Cytoplasm By similarity HAMAP MF_00123.

Sequence similarities

Belongs to the class-I aminoacyl-tRNA synthetase family. HAMAP MF_00123 RuleBase RU003489

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Motif132 – 14211"HIGH" region By similarity HAMAP MF_00123

Sequences

Sequence LengthMass (Da)Tools
C7QZD8 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: CCCB72A5A79A9CD0

FASTA55860,373
        10         20         30         40         50         60 
MTPDELSTAL HTALSDAVSA GAITLASSDV PDMIHVERPR QRDHGDWATN VALQLAKKAG 

        70         80         90        100        110        120 
QPPRVLADAL AARLQEQAGI ARVDVAGPGF LNITLDTAAA GELARTIVEA GGEYGRSAVR 

       130        140        150        160        170        180 
AGRTINLEFV SANPTGPIHI GGTRWAAVGD SLARILQATG AHVVKEYYFN DHGAQIDRFA 

       190        200        210        220        230        240 
RSLVASAQGL PVPEDGYGGQ YIHDIAQQVL ALAAAEGIDV LGLDPADTQE FFRARGVELM 

       250        260        270        280        290        300 
FGQIKQSLHD FGVDFDVYFH ENHLYESGEV DKAIAKLRDN GHIFEQDGAT WLRTTTFGDD 

       310        320        330        340        350        360 
KDRVVIKSDG DAAYIAGDIA YYLNKRERGS DEVVIMLGAD HHGYIGRLMA VCAAFGDTPH 

       370        380        390        400        410        420 
TNLEVLIGQM VNLVKDGEPL RMSKRAGTVV TLEDLVDIVG VDAARYALAR SSVDQSIDID 

       430        440        450        460        470        480 
LDVLAKASND NPVFYVQYAH ARTANVARNA AAAGVHRDDA FDPATLSHPT ETELIGRLTE 

       490        500        510        520        530        540 
YPRIVEQAAQ LREQHRVARY AEALAGAYHK WYSECRVTPL SGAEVTDTHR TRLWLNDATG 

       550 
QVLRNALSLL GVSAPERM

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001706 Genomic DNA. Translation: ACV09436.1.
RefSeqYP_003161739.1. NC_013174.1.

3D structure databases

ProteinModelPortalC7QZD8.
ModBaseSearch...

Protein-protein interaction databases

STRINGC7QZD8.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8380957.
GenomeReviewsGene locus Jden_1793 in contig CP001706_GR.
KEGGjde:Jden_1793.
PATRIC22163801. VBIJonDen9837_1874.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMAFDVYFHE.
ProtClustDBPRK01611.

Family and domain databases

HAMAPMF_00123. Arg_tRNA_synth.
[Tree]
InterProIPR001412. aa-tRNA-synth_I_CS.
IPR001278. Arg-tRNA-synth_Ia.
IPR015945. Arg-tRNA-synth_Ia_core.
IPR005148. Arg-tRNA-synth_N.
IPR008909. DALR_anticod-bd.
IPR014729. Rossmann-like_a/b/a_fold.
IPR009080. tRNAsynth_1a_anticodon-bd.
[Graphical view]
Gene3DG3DSA:3.30.1360.70. Arg-tRNA-synth_Ic_N. 1 hit.
G3DSA:3.40.50.620. Rossmann-like_a/b/a_fold. 1 hit.
KOK01887.
PANTHERPTHR11956. Arg_tRNA-synt_1c. 1 hit.
PfamPF03485. Arg_tRNA_synt_N. 1 hit.
PF05746. DALR_1. 1 hit.
PF00750. tRNA-synt_1d. 1 hit.
[Graphical view]
PRINTSPR01038. TRNASYNTHARG.
SMARTSM01016. Arg_tRNA_synt_N. 1 hit.
SM00836. DALR_1. 1 hit.
[Graphical view]
SUPFAMSSF55190. Arg-tRNA-synth_Ic_N. 1 hit.
SSF47323. tRNAsyn_1a_bind. 1 hit.
TIGRFAMsTIGR00456. ArgS. 1 hit.
PROSITEPS00178. AA_TRNA_LIGASE_I. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7QZD8_JONDD
AccessionPrimary (citable) accession number: C7QZD8
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 25, 2012
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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