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Protein
Submitted name:

Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)

Gene

Cyan8802_4412

Organism
Cyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. signal transducer activity Source: InterPro

GO - Biological processi

  1. phosphorelay signal transduction system Source: InterPro
  2. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

BioCyciCSP395962:GJC3-4462-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S)Imported
Gene namesi
Ordered Locus Names:Cyan8802_4412Imported
OrganismiCyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2))Imported
Taxonomic identifieri395962 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000000415: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi395962.Cyan8802_4412.

Structurei

3D structure databases

ProteinModelPortaliC7QU84.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiDSYVCAA.
OrthoDBiEOG69GZGV.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7QU84-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEATCNAPL SSTEVTQSLH LLLLEDVPED VELIVLSLSN ADIEFTYEIA
60 70 80 90 100
QTATLYQEKL QQQTYSAILA DYRLPGFNGL QALKMLQEAG QKIPFILVTG
110 120 130 140 150
SLGEEAAVEC MKAGVTDYIV KDRLFQLPTI LMRSLEEFAL RREQQRVMEE
160 170 180 190 200
RRQAEIALRA SEKRFRALIE NASDIILIVA PDSQLTYASP SVERVLGYDA
210 220 230 240 250
SSLTGQRFFD LIHPDEQGEI IGFFDKIKET SNLSQLLPDF RVRTQKDTWV
260 270 280 290 300
ILEAIAKNLQ EDPAVGGFVV NCHDITERHQ TAEQLRYDAS HDKLTGLANR
310 320 330 340 350
SALLKQLKRA IEQKKRRKED HFALLFLDLD RFKVINDGLG HLMGDQLLKE
360 370 380 390 400
MAKRLQRCHR EGDLLARFGG DEFVFFLKEI RQQEQAIVVA ERIHQALREP
410 420 430 440 450
FILNHQEVFI SASIGITLSA DHYDSPEQML RDADTAMYWA KARGQGGHTI
460 470 480 490 500
FAPTMHLSAL KQLHLESDLR QAIQRQELVV YYQPIFSLDT QKIVGAEALV
510 520 530 540 550
RWQPPEKPLI PPNDFIPLAE ETGLILEIDH WVLKSACQQL YQWQQEFKTL
560 570 580 590 600
APQFISVNLS PKQFSQPNLT EKIAQTIKET GLAEQCLKIE ITETVFLENS
610 620 630 640 650
TSVLEILCQL QQLNIQICLD DFGTGYSSLS YLHQFPLNSL KLDRTFVSRL
660 670 680 690 700
GKTNKNDTIV RIVATLANEL DLELIAEGIE EIEQIQLLHY LGYQWGQGYC
710 720
FSPPVDSNSF IEFLIENPMK YRIQES
Length:726
Mass (Da):82,799
Last modified:October 13, 2009 - v1
Checksum:i9DC5325A2E36A1EA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001701 Genomic DNA. Translation: ACV03197.1.
RefSeqiWP_015785327.1. NC_013161.1.
YP_003140032.1. NC_013161.1.

Genome annotation databases

EnsemblBacteriaiACV03197; ACV03197; Cyan8802_4412.
GeneIDi8393764.
KEGGicyh:Cyan8802_4412.
PATRICi21590471. VBICyaSp112625_4525.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001701 Genomic DNA. Translation: ACV03197.1.
RefSeqiWP_015785327.1. NC_013161.1.
YP_003140032.1. NC_013161.1.

3D structure databases

ProteinModelPortaliC7QU84.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395962.Cyan8802_4412.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV03197; ACV03197; Cyan8802_4412.
GeneIDi8393764.
KEGGicyh:Cyan8802_4412.
PATRICi21590471. VBICyaSp112625_4525.

Phylogenomic databases

eggNOGiCOG2202.
HOGENOMiHOG000136246.
OMAiDSYVCAA.
OrthoDBiEOG69GZGV.

Enzyme and pathway databases

BioCyciCSP395962:GJC3-4462-MONOMER.

Family and domain databases

Gene3Di3.20.20.450. 1 hit.
InterProiIPR011006. CheY-like_superfamily.
IPR001633. EAL_dom.
IPR000160. GGDEF_dom.
IPR029787. Nucleotide_cyclase.
IPR000014. PAS.
IPR013767. PAS_fold.
IPR001789. Sig_transdc_resp-reg_receiver.
[Graphical view]
PfamiPF00563. EAL. 1 hit.
PF00990. GGDEF. 1 hit.
PF00989. PAS. 1 hit.
PF00072. Response_reg. 1 hit.
[Graphical view]
SMARTiSM00052. EAL. 1 hit.
SM00267. GGDEF. 1 hit.
SM00091. PAS. 1 hit.
SM00448. REC. 1 hit.
[Graphical view]
SUPFAMiSSF141868. SSF141868. 1 hit.
SSF52172. SSF52172. 1 hit.
SSF55073. SSF55073. 1 hit.
SSF55785. SSF55785. 1 hit.
TIGRFAMsiTIGR00254. GGDEF. 1 hit.
TIGR00229. sensory_box. 1 hit.
PROSITEiPS50883. EAL. 1 hit.
PS50887. GGDEF. 1 hit.
PS50112. PAS. 1 hit.
PS50110. RESPONSE_REGULATORY. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 8802Imported.

Entry informationi

Entry nameiC7QU84_CYAP0
AccessioniPrimary (citable) accession number: C7QU84
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 39 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.