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C7QS62 (C7QS62_CYAP0) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Elongation factor Tu HAMAP-Rule MF_00118
Short name=EF-Tu HAMAP-Rule MF_00118
Gene names
Name:tuf HAMAP-Rule MF_00118
Ordered Locus Names:Cyan8802_1561 EMBL ACV00471.1
OrganismCyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2)) [Complete proteome] [HAMAP] EMBL ACV00471.1
Taxonomic identifier395962 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Oscillatoriophycideae › Chroococcales › Cyanothece

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis By similarity. HAMAP-Rule MF_00118 RuleBase RU000325

Subunit structure

Monomer By similarity. HAMAP-Rule MF_00118

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00118.

Sequence similarities

Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily. HAMAP-Rule MF_00118 RuleBase RU000325

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding19 – 268GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding81 – 855GTP By similarity HAMAP-Rule MF_00118
Nucleotide binding136 – 1394GTP By similarity HAMAP-Rule MF_00118

Sequences

Sequence LengthMass (Da)Tools
C7QS62 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 61CDD8F55FD17BA4

FASTA40944,647
        10         20         30         40         50         60 
MARAKFERTK PHVNIGTIGH VDHGKTTLTA AITMTLAAQG KAKARNYEDI DAAPEEKARG 

        70         80         90        100        110        120 
ITINTAHVEY ETDSRHYAHV DCPGHADYVK NMITGAAQMD GGILVVSAAD GPMPQTREHI 

       130        140        150        160        170        180 
LLAKQVGVPN LVVFLNKQDM VDDEELLELV ELEVRELLTE YGFDGDNIPI VAGSALQAVE 

       190        200        210        220        230        240 
ALKANPKIAK GDNEWTDKIL ALMDEVDAYI PEPEREIDKP FLMAVEDVFS ISGRGTVATG 

       250        260        270        280        290        300 
RIERGKVKVG ETVEIVGIRA TSSTTVTGVE MFQKTLEEGL AGDNVGLLLR GVKKEDIERG 

       310        320        330        340        350        360 
MVIAKPGSIT PHTQFEGEVY VLTKEEGGRH TPFFKNYKPQ FYVRTTDVTG SIVDYTSDEG 

       370        380        390        400 
ETVEMVMPGD RIKMTVELIN PIAIEQGMRF AIREGGRTIG AGVVSKILK

« Hide

References

[1]"Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 8802.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001701 Genomic DNA. Translation: ACV00471.1.
RefSeqYP_003137306.1. NC_013161.1.

3D structure databases

ProteinModelPortalC7QS62.
SMRC7QS62. Positions 2-409.
ModBaseSearch...

Protein-protein interaction databases

STRING395962.Cyan8802_1561.
C7QS62.

Proteomic databases

PRIDEC7QS62.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV00471; ACV00471; Cyan8802_1561.
GeneID8390873.
KEGGcyh:Cyan8802_1561.
PATRIC21584629. VBICyaSp112625_1644.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0050.
HOGENOMHOG000229290.
KOK02358.
OMAHTDFEAN.
ProtClustDBPRK00049.

Enzyme and pathway databases

BioCycCSP395962:GJC3-1570-MONOMER.

Family and domain databases

HAMAPMF_00118_B. EF_Tu_B.
InterProIPR000795. EF_GTP-bd_dom.
IPR005225. Small_GTP-bd_dom.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004541. Transl_elong_EFTu/EF1A_bac/org.
IPR004160. Transl_elong_EFTu/EF1A_C.
IPR009000. Transl_elong_init/rib_B-barrel.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50465. Elong_init_C. 1 hit.
SSF50447. Translat_factor. 1 hit.
TIGRFAMsTIGR00485. EF-Tu. 1 hit.
TIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7QS62_CYAP0
AccessionPrimary (citable) accession number: C7QS62
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info