Skip Header

Contribute Send feedback
Read comments (?) or add your own

C7QQF6 (C7QQF6_CYAP0) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein namesRecommended name:
Glycine--tRNA ligase alpha subunit HAMAP MF_00254
EC=6.1.1.14 HAMAP MF_00254
Alternative name(s):
Glycyl-tRNA synthetase alpha subunit HAMAP MF_00254
Gene names
Name:glyQ HAMAP MF_00254
Ordered Locus Names:Cyan8802_2690
OrganismCyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2)) [Complete proteome] [HAMAP] EMBL ACV01550.1
Taxonomic identifier395962 [NCBI]
Taxonomic lineageBacteria › Cyanobacteria › Chroococcales › Cyanothece

Protein attributes

Sequence length290 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-tRNA(Gly). HAMAP MF_00254

Subunit structure

Tetramer of two alpha and two beta subunits By similarity. HAMAP MF_00254

Subcellular location

Cytoplasm By similarity HAMAP MF_00254.

Sequence similarities

Belongs to the class-II aminoacyl-tRNA synthetase family. HAMAP MF_00254

Ontologies

Keywords
   Biological processProtein biosynthesis HAMAP MF_00254
   Cellular componentCytoplasm HAMAP MF_00254
   LigandATP-binding HAMAP MF_00254
Nucleotide-binding
   Molecular functionAminoacyl-tRNA synthetase HAMAP MF_00254 EMBL ACV01550.1
Ligase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processglycyl-tRNA aminoacylation

Inferred from electronic annotation. Source: HAMAP

   Cellular componentcytoplasm

Inferred from electronic annotation. Source: UniProtKB-SubCell

   Molecular functionATP binding

Inferred from electronic annotation. Source: HAMAP

glycine-tRNA ligase activity

Inferred from electronic annotation. Source: HAMAP

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C7QQF6 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 25EC4CEA9C1A8C76

FASTA29033,712
        10         20         30         40         50         60 
MSINFQEIIA KLHQFWSDRG CLIAQPYDTE KGAGTMSPHT FLRAIGPEPW SVAYVEPCRR 

        70         80         90        100        110        120 
PTDGRYGENP NRFQHYFQYQ VLIKPSPDNI QDIYLDSLRV LGIHPEDHDI RFVEDNWESP 

       130        140        150        160        170        180 
TLGAWGVGWE VWLDGMEITQ FTYFQQCGGI DCRPVSIEIT YGLERLAMYL QDVEAITKIQ 

       190        200        210        220        230        240 
WNNRVNYGEI FLQNEIEQCT YNFEASDPDL LLKLFNLYEQ ETKQLIEKGL VLPSLDYVLK 

       250        260        270        280        290 
CSHSFNLLDA RGVIAVAERT RYIGRIRNLA REVAQLYLQQ RETLGFPLCK

« Hide

References

[1]"Complete sequence of chromosome of Cyanothece sp. PCC 8802."
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H., Bruce D., Goodwin L., Pitluck S., Sims D., Meincke L., Brettin T., Detter J.C., Han C., Larimer F., Land M., Hauser L., Kyrpides N. expand/collapse author list , Mikhailova N., Pakrasi H.B., Sherman L.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 8802.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP001701 Genomic DNA. Translation: ACV01550.1.
RefSeqYP_003138385.1. NC_013161.1.

3D structure databases

ProteinModelPortalC7QQF6.
SMRC7QQF6. Positions 5-279.
ModBaseSearch...

Protein-protein interaction databases

STRINGC7QQF6.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8392016.
GenomeReviewsGene locus Cyan8802_2690 in contig CP001701_GR.
KEGGcyh:Cyan8802_2690.
PATRIC21586947. VBICyaSp112625_2788.

Organism-specific databases

CMRSearch...

Phylogenomic databases

OMACRRPTDG.
PhylomeDBC7QQF6.
ProtClustDBPRK09348.

Family and domain databases

HAMAPMF_00254. Gly_tRNA_synth_alpha.
[Tree]
InterProIPR006194. Gly-tRNA-synth_II_heterodimer.
IPR002310. Gly-tRNA_synth_IIc_asu.
[Graphical view]
KOK01878.
PfamPF02091. tRNA-synt_2e. 1 hit.
[Graphical view]
PRINTSPR01044. TRNASYNTHGA.
TIGRFAMsTIGR00388. GlyQ. 1 hit.
PROSITEPS50861. AA_TRNA_LIGASE_II_GLYAB. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7QQF6_CYAP0
AccessionPrimary (citable) accession number: C7QQF6
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 25, 2012
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry info