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C7QPG9 (C7QPG9_CYAP0) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 32. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Ordered Locus Names:Cyan8802_2654 EMBL ACV01516.1
OrganismCyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2)) [Complete proteome] [HAMAP] EMBL ACV01516.1
Taxonomic identifier395962 [NCBI]
Taxonomic lineageBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece

Protein attributes

Sequence length461 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is further processed into a mature form.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   DomainSignal EMBL ACV01516.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Signal peptide1 – 3636 Potential EMBL ACV01516.1
Chain37 – 461425 Potential EMBL ACV01516.1
PRO_5000511971

Sequences

Sequence LengthMass (Da)Tools
C7QPG9 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 40EE5A37154844F0

FASTA46152,463
        10         20         30         40         50         60 
MAQKNSFWLN YWTYLASVCC AALLIIVCSA LPAKADVIYH AFDQKFQEIK AELPELKNIG 

        70         80         90        100        110        120 
YTYVQVSPPQ KSNPAETWWG RYQPLDYVIC SDKLDKDCPL GNENDLKELI DAAHKNDQKI 

       130        140        150        160        170        180 
IVDVVFNHMA NYPPNVDTLN YPPLFSSEDF HNRTCISNDN DRFQVTHGWL GRDCDLPDLK 

       190        200        210        220        230        240 
TETPHVREEA KKYLKHLVSL GADGFRFDAA KHIDRDFFLE VLQAAPGKYY YGEVLGSNMN 

       250        260        270        280        290        300 
DYNQYTDIMD VTDDKLIYTI RNAIKWGGDL RSLVNPQDTG RALPGDKAVT FAVTHDTVNN 

       310        320        330        340        350        360 
DKSEDDYDRK DQLLANAYVL AIREGFPLIY RDDAKEEITK AGVKFHEKMM GQPQYFRNGN 

       370        380        390        400        410        420 
EIAPGADNGN MLFIERGGKG LTIINKSGEF FEVKAAKMPG LETGCYKDLH YNFPMSVHYG 

       430        440        450        460 
KDGNKYINKW GSPDRGGIKI GPRDVLFFIQ TYADDCKAIW N 

« Hide

References

[1]"Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: PCC 8802.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001701 Genomic DNA. Translation: ACV01516.1.
RefSeqYP_003138351.1. NC_013161.1.

3D structure databases

ProteinModelPortalC7QPG9.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING395962.Cyan8802_2654.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV01516; ACV01516; Cyan8802_2654.
GeneID8391980.
KEGGcyh:Cyan8802_2654.
PATRIC21586879. VBICyaSp112625_2754.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0366.
HOGENOMHOG000069715.
KOK01176.
OMADLDPNNW.
OrthoDBEOG6K6V4W.
ProtClustDBCLSK2411020.

Enzyme and pathway databases

BioCycCSP395962:GJC3-2677-MONOMER.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7QPG9_CYAP0
AccessionPrimary (citable) accession number: C7QPG9
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: November 13, 2013
This is version 32 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)