Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

ATP-dependent DNA helicase RecQ

Gene

Cyan8802_1065

Organism
Cyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2))
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. ATP-dependent 3'-5' DNA helicase activity Source: InterPro
  3. nucleic acid binding Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
  3. DNA replication Source: InterPro
  4. SOS response Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

HelicaseUniRule annotationImported, Hydrolase

Keywords - Ligandi

ATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciCSP395962:GJC3-1071-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA helicase RecQImported
Gene namesi
Ordered Locus Names:Cyan8802_1065Imported
OrganismiCyanothece sp. (strain PCC 8802) (Synechococcus sp. (strain RF-2))Imported
Taxonomic identifieri395962 [NCBI]
Taxonomic lineageiBacteriaCyanobacteriaOscillatoriophycideaeChroococcalesCyanothece
ProteomesiUP000000415: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. intracellular Source: InterPro
Complete GO annotation...

Interactioni

Protein-protein interaction databases

STRINGi395962.Cyan8802_1065.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0514.
HOGENOMiHOG000044388.
KOiK03654.
OMAiPGMTLVI.
OrthoDBiEOG6ZSPDC.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.150.80. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR004589. DNA_helicase_ATP-dep_RecQ.
IPR006293. DNA_helicase_ATP-dep_RecQ_bac.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR029491. Helicase_HTH.
IPR010997. HRDC-like.
IPR002121. HRDC_dom.
IPR027417. P-loop_NTPase.
IPR018982. RQC_domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00570. HRDC. 1 hit.
PF14493. HTH_40. 1 hit.
PF09382. RQC. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00341. HRDC. 1 hit.
SM00956. RQC. 1 hit.
[Graphical view]
SUPFAMiSSF47819. SSF47819. 1 hit.
SSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR01389. recQ. 1 hit.
TIGR00614. recQ_fam. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS50967. HRDC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7QME8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFQSNSLEQS LKYFFGYDSF RPGQAKIIQE ALQNRDLLVI MPTGGGKSLC
60 70 80 90 100
FQLPALLKPG LTVVVSPLIA LMQDQVDTLL DNGIGATFLN SSLKSEEVRS
110 120 130 140 150
REQAIIKGKI KLLYVAPERL LNDKFTPFLD FIAEKIGVSF FAIDEAHCVS
160 170 180 190 200
EWGHDFRPEY RQLKQLRQRY PQVPMLALTA TATKRVREDI IHQLELKQPG
210 220 230 240 250
IHITSFNRPN LDYDVQFKER RSYNKLLSYI RQQKGSGIVY CLSRRSVDDI
260 270 280 290 300
AFRLQNDGIK ALPYHAGMAD EARALNQNRF IRDDVQVMVA TIAFGMGINK
310 320 330 340 350
PDVRFVIHYD LPRNLEGYYQ ESGRAGRDGE PAECTLFFSL SDLKKIEYLI
360 370 380 390 400
DQKSTPQEQK IARQQLRQVV DYAEGTECRR TIVLRYFGER FAGNCGKCDN
410 420 430 440 450
CRDPKPLEDW TIEAQKFLSC VARCRERFGM THIIDVLRGS KKRKIEQNGH
460 470 480 490 500
HLLSTYGIGQ DRSVAEWKML GRSLIHQGLL DETSDGFSVL KLNKGSWEVL
510 520 530 540 550
RKQRTVEIAI TQASASKVLG EYNPRAAEIE LLFERLRQLR KQLADSNQIA
560 570 580 590 600
PYVIFADSSL RLMAQLKPKT LEEFAKISGV TDYKLSQYGE RFLSEIRAFS
610 620 630 640 650
QEQSLPNPLP TQSNMITLQL YQQGLNVQDI AEMRGLKEST VYSHLSELIE
660 670 680 690 700
MQQPVDINQF VLPVKKDLII QAIKKIGDQS LTPIKEYLGD NYSYNEIRLV

RAWYRRENK
Length:709
Mass (Da):81,338
Last modified:October 13, 2009 - v1
Checksum:i2213171DE91ED16A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001701 Genomic DNA. Translation: ACU99996.1.
RefSeqiWP_015783448.1. NC_013161.1.
YP_003136832.1. NC_013161.1.

Genome annotation databases

EnsemblBacteriaiACU99996; ACU99996; Cyan8802_1065.
GeneIDi8390374.
KEGGicyh:Cyan8802_1065.
PATRICi21583622. VBICyaSp112625_1144.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001701 Genomic DNA. Translation: ACU99996.1.
RefSeqiWP_015783448.1. NC_013161.1.
YP_003136832.1. NC_013161.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi395962.Cyan8802_1065.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU99996; ACU99996; Cyan8802_1065.
GeneIDi8390374.
KEGGicyh:Cyan8802_1065.
PATRICi21583622. VBICyaSp112625_1144.

Phylogenomic databases

eggNOGiCOG0514.
HOGENOMiHOG000044388.
KOiK03654.
OMAiPGMTLVI.
OrthoDBiEOG6ZSPDC.

Enzyme and pathway databases

BioCyciCSP395962:GJC3-1071-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.150.80. 1 hit.
3.40.50.300. 2 hits.
InterProiIPR011545. DEAD/DEAH_box_helicase_dom.
IPR004589. DNA_helicase_ATP-dep_RecQ.
IPR006293. DNA_helicase_ATP-dep_RecQ_bac.
IPR014001. Helicase_ATP-bd.
IPR001650. Helicase_C.
IPR029491. Helicase_HTH.
IPR010997. HRDC-like.
IPR002121. HRDC_dom.
IPR027417. P-loop_NTPase.
IPR018982. RQC_domain.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00270. DEAD. 1 hit.
PF00271. Helicase_C. 1 hit.
PF00570. HRDC. 1 hit.
PF14493. HTH_40. 1 hit.
PF09382. RQC. 1 hit.
[Graphical view]
SMARTiSM00487. DEXDc. 1 hit.
SM00490. HELICc. 1 hit.
SM00341. HRDC. 1 hit.
SM00956. RQC. 1 hit.
[Graphical view]
SUPFAMiSSF47819. SSF47819. 1 hit.
SSF52540. SSF52540. 2 hits.
TIGRFAMsiTIGR01389. recQ. 1 hit.
TIGR00614. recQ_fam. 1 hit.
PROSITEiPS51192. HELICASE_ATP_BIND_1. 1 hit.
PS51194. HELICASE_CTER. 1 hit.
PS50967. HRDC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Novel metabolic attributes of the genus Cyanothece, comprising a group of unicellular nitrogen-fixing Cyanobacteria."
    Bandyopadhyay A., Elvitigala T., Welsh E., Stockel J., Liberton M., Min H., Sherman L.A., Pakrasi H.B.
    MBio 2:E214-E214(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: PCC 8802Imported.

Entry informationi

Entry nameiC7QME8_CYAP0
AccessioniPrimary (citable) accession number: C7QME8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: January 7, 2015
This is version 47 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.