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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Caci_5866

Organism
Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCACI479433:GI6Z-5903-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Caci_5866Imported
OrganismiCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)Imported
Taxonomic identifieri479433 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCatenulisporalesCatenulisporaceaeCatenulispora
ProteomesiUP000000851 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479433.Caci_5866.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7QDV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAEVNLPVLP PVEPMLAKSA AKVPTGDYLY EPKWDGFRCI VFRDGDRVVL
60 70 80 90 100
GSRGGKELGR YFPELVESLK EALPARCVVD GEIVVVVDSR LDFDRLSDRI
110 120 130 140 150
HPAASRVKLL AERTPASFIG FDLLALGDRD LTAEPFADRR AALLSAVAKH
160 170 180 190 200
EYVHVTRATD DPELAATWFQ HFEGAGLDGV VAKPSQGAYT PGERSMVKIK
210 220 230 240 250
HERTADVVVA GYRLHKTGPI VGSLMLGLYG EDGILNYVGG SSAFTMARRK
260 270 280 290 300
ELIDELAPYL LPEGESHPWV DAPDEGDGDS GSGSGSDSEH RRPGTLNRWN
310 320 330 340 350
AGKDVSFIAL RPELVCEVRY DQLQGDRFRH NGRFVRWRPD RDAASCSYEQ
360
LDVPAAYDLA DVFGDAGQD
Length:369
Mass (Da):40,511
Last modified:October 13, 2009 - v1
Checksum:i3877F5378F9CA7F9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001700 Genomic DNA. Translation: ACU74724.1.

Genome annotation databases

EnsemblBacteriaiACU74724; ACU74724; Caci_5866.
KEGGicai:Caci_5866.
PATRICi21290449. VBICatAci36872_5971.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001700 Genomic DNA. Translation: ACU74724.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479433.Caci_5866.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU74724; ACU74724; Caci_5866.
KEGGicai:Caci_5866.
PATRICi21290449. VBICatAci36872_5971.

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000222508.
OMAiYRPHKSQ.
OrthoDBiEOG63NMFT.

Enzyme and pathway databases

BioCyciCACI479433:GI6Z-5903-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 2 hits.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897Imported.

Entry informationi

Entry nameiC7QDV0_CATAD
AccessioniPrimary (citable) accession number: C7QDV0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: July 22, 2015
This is version 38 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.