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C7QDV0

- C7QDV0_CATAD

UniProt

C7QDV0 - C7QDV0_CATAD

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Caci_5866

Organism
Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 30 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCACI479433:GI6Z-5903-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Caci_5866Imported
    OrganismiCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)Imported
    Taxonomic identifieri479433 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCatenulisporineaeCatenulisporaceaeCatenulispora
    ProteomesiUP000000851: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi479433.Caci_5866.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000222508.
    KOiK01971.
    OMAiYRPHKSQ.
    OrthoDBiEOG63NMFT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 2 hits.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C7QDV0-1 [UniParc]FASTAAdd to Basket

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    MAEVNLPVLP PVEPMLAKSA AKVPTGDYLY EPKWDGFRCI VFRDGDRVVL    50
    GSRGGKELGR YFPELVESLK EALPARCVVD GEIVVVVDSR LDFDRLSDRI 100
    HPAASRVKLL AERTPASFIG FDLLALGDRD LTAEPFADRR AALLSAVAKH 150
    EYVHVTRATD DPELAATWFQ HFEGAGLDGV VAKPSQGAYT PGERSMVKIK 200
    HERTADVVVA GYRLHKTGPI VGSLMLGLYG EDGILNYVGG SSAFTMARRK 250
    ELIDELAPYL LPEGESHPWV DAPDEGDGDS GSGSGSDSEH RRPGTLNRWN 300
    AGKDVSFIAL RPELVCEVRY DQLQGDRFRH NGRFVRWRPD RDAASCSYEQ 350
    LDVPAAYDLA DVFGDAGQD 369
    Length:369
    Mass (Da):40,511
    Last modified:October 13, 2009 - v1
    Checksum:i3877F5378F9CA7F9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001700 Genomic DNA. Translation: ACU74724.1.
    RefSeqiYP_003116565.1. NC_013131.1.

    Genome annotation databases

    EnsemblBacteriaiACU74724; ACU74724; Caci_5866.
    GeneIDi8337227.
    KEGGicai:Caci_5866.
    PATRICi21290449. VBICatAci36872_5971.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001700 Genomic DNA. Translation: ACU74724.1 .
    RefSeqi YP_003116565.1. NC_013131.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 479433.Caci_5866.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU74724 ; ACU74724 ; Caci_5866 .
    GeneIDi 8337227.
    KEGGi cai:Caci_5866.
    PATRICi 21290449. VBICatAci36872_5971.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000222508.
    KOi K01971.
    OMAi YRPHKSQ.
    OrthoDBi EOG63NMFT.

    Enzyme and pathway databases

    BioCyci CACI479433:GI6Z-5903-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 2 hits.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897Imported.

    Entry informationi

    Entry nameiC7QDV0_CATAD
    AccessioniPrimary (citable) accession number: C7QDV0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 30 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3