C7QDV0 (C7QDV0_CATAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACU74724.1

Gene names

Ordered Locus Names:

Caci_5866

Organism

Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) [Complete proteome] [HAMAP] EMBL ACU74724.1

Taxonomic identifier

479433 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Catenulisporineae › Catenulisporaceae › Catenulispora › Catenulispora acidiphila

Protein attributes

Sequence length	369 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACU74724.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA ligation involved in DNA repair Inferred from electronic annotation. Source: InterPro DNA recombination Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7QDV0 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 3877F5378F9CA7F9	FASTA	369	40,511
	10 20 30 40 50 60 MAEVNLPVLP PVEPMLAKSA AKVPTGDYLY EPKWDGFRCI VFRDGDRVVL GSRGGKELGR 70 80 90 100 110 120 YFPELVESLK EALPARCVVD GEIVVVVDSR LDFDRLSDRI HPAASRVKLL AERTPASFIG 130 140 150 160 170 180 FDLLALGDRD LTAEPFADRR AALLSAVAKH EYVHVTRATD DPELAATWFQ HFEGAGLDGV 190 200 210 220 230 240 VAKPSQGAYT PGERSMVKIK HERTADVVVA GYRLHKTGPI VGSLMLGLYG EDGILNYVGG 250 260 270 280 290 300 SSAFTMARRK ELIDELAPYL LPEGESHPWV DAPDEGDGDS GSGSGSDSEH RRPGTLNRWN 310 320 330 340 350 360 AGKDVSFIAL RPELVCEVRY DQLQGDRFRH NGRFVRWRPD RDAASCSYEQ LDVPAAYDLA DVFGDAGQD

References

[1]

"Complete genome sequence of Catenulispora acidiphila type strain (ID 139908)." Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Mikhailova N., Pati A., Ivanov N., Mavromatis K., Chen A., Palaniappan K., Chai P. , Land M., Hauser L., Chang Y.J., Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z., Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:119-125(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001700 Genomic DNA. Translation: ACU74724.1.
RefSeq	YP_003116565.1. NC_013131.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	479433.Caci_5866.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU74724; ACU74724; Caci_5866.
GeneID	8337227.
KEGG	cai:Caci_5866.
PATRIC	21290449. VBICatAci36872_5971.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1793.
HOGENOM	HOG000222508.
KO	K01971.
OMA	FRHAARF.
ProtClustDB	PRK08224.
Enzyme and pathway databases
BioCyc	CACI479433:GI6Z-5903-MONOMER.
Family and domain databases
Gene3D	2.40.50.140. 1 hit.
InterPro	IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012340. NA-bd_OB-fold. [Graphical view]
Pfam	PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
SUPFAM	SSF50249. Nucleic_acid_OB. 1 hit.
PROSITE	PS00697. DNA_LIGASE_A1. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7QDV0_CATAD

Accession

Primary (citable) accession number: C7QDV0

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 26 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)