C7QDR7 (C7QDR7_CATAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, SARP family EMBL ACU74691.1

Gene names

Ordered Locus Names:

Caci_5833

Organism

Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) [Complete proteome] [HAMAP] EMBL ACU74691.1

Taxonomic identifier

479433 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Catenulisporineae › Catenulisporaceae › Catenulispora › Catenulispora acidiphila

Protein attributes

Sequence length	937 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Domain	Repeat RuleBase RU003537 TPR repeat RuleBase RU003339
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	defense response Inferred from electronic annotation. Source: InterPro intracellular signal transduction Inferred from electronic annotation. Source: GOC regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	ADP binding Inferred from electronic annotation. Source: InterPro DNA binding Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7QDR7 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 493D785FB1CFB1D8	FASTA	937	100,726
	10 20 30 40 50 60 MVVRASDTDP IAIPAALQRG VLAILLSRAN LVVSRDELAE TLWDGQNPGT ARTTLAAYVS 70 80 90 100 110 120 RLRRVLGPDA GRRIGTRPPG YVIEIDAEEY DCARAGDLHA RARAAAERGD WAAVQGLAAD 130 140 150 160 170 180 GLRLWRGTPY QDVPVPRLHR EDAAALDAVR VQLTELTVEA DLRLGRGDSA ISTLMRLTEQ 190 200 210 220 230 240 EPLRESFSEK LMMALAAQGR RAEALAVFHR ARKVLRENLG IDPGPDLARA HHDVLAASGG 250 260 270 280 290 300 DRPASAAASA AAASATGSAA ASPERIRVRG PRQLPPAARH FTGREAELAA MDEAAASGEV 310 320 330 340 350 360 LVVSGLAGVG KTALTTHWAH QAAPRYPDGQ VFVGLHGFDP HSVPMTAHTA CSILLESLGL 370 380 390 400 410 420 ATSEIPADPD ARTALYRTVV AGRRLLLVLD DAWDAAQIRP LIPGTAGSQV VVTSRNRLAG 430 440 450 460 470 480 LVAADGARPI LLAPLDNGRS MELLARRSGI RPRPDEPADT AAAEALAAAC AGLPLALTIA 490 500 510 520 530 540 AARLQLDPDL SWSALTERLH DRRGALSTLD VGEASGSLRA VFSMSYQRLS RSAAALFRLL 550 560 570 580 590 600 GIHPGPDIAM AAAVSLAGSA DTSSTEQALE ELLSASLLHR HAGRFRFHDL VRAYAAETAL 610 620 630 640 650 660 EDSPEVRTAA RVRIHDHCLR SAIEADRMLR PTREPLSLPA PVPDVRPESF ADVAAATAWF 670 680 690 700 710 720 QEERQVLAAV VALASREQDD EYAHRLPWAI STYLNRRGEW PALAELHLLG AEAADRTGDP 730 740 750 760 770 780 RARARTHTDA SSFLLQILSF DEARRHLELS MALWQELGDL RGAWLSEHNM GHLCHKEGRH 790 800 810 820 830 840 AEAAEHARRA LEHARARGWA PDVALALSTA AWSLTHCDDH AGALLLAAEA IELDRCAGDR 850 860 870 880 890 900 NGEAHAYDTV GLASFRLGRY PEALAAYHKA LRLFEDLGDI RFRGRVLMRI GQVRRESGET 910 920 930 AAAHSAWSQA LKLFEQVGAP ESDELREMLD GLDGSDS

References

[1]

"Complete genome sequence of Catenulispora acidiphila type strain (ID 139908)." Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Mikhailova N., Pati A., Ivanov N., Mavromatis K., Chen A., Palaniappan K., Chai P. , Land M., Hauser L., Chang Y.J., Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z., Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:119-125(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001700 Genomic DNA. Translation: ACU74691.1.
RefSeq	YP_003116532.1. NC_013131.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	479433.Caci_5833.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU74691; ACU74691; Caci_5833.
GeneID	8337194.
KEGG	cai:Caci_5833.
PATRIC	21290383. VBICatAci36872_5938.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG3629.
HOGENOM	HOG000253135.
OMA	HVEERRE.
Enzyme and pathway databases
BioCyc	CACI479433:GI6Z-5870-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 1.25.40.10. 4 hits.
InterPro	IPR005158. BTAD. IPR000767. Disease_R. IPR002182. NB-ARC. IPR001867. Sig_transdc_resp-reg_C. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR001440. TPR-1. IPR013026. TPR-contain_dom. IPR011990. TPR-like_helical. IPR019734. TPR_repeat. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF03704. BTAD. 1 hit. PF00931. NB-ARC. 1 hit. PF00515. TPR_1. 1 hit. PF00486. Trans_reg_C. 1 hit. [Graphical view]
PRINTS	PR00364. DISEASERSIST.
SMART	SM01043. BTAD. 1 hit. SM00028. TPR. 3 hits. SM00862. Trans_reg_C. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS50005. TPR. 2 hits. PS50293. TPR_REGION. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7QDR7_CATAD

Accession

Primary (citable) accession number: C7QDR7

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 29 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)