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Protein
Submitted name:

Transcriptional regulator, LuxR family

Gene

Caci_3634

Organism
Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Transcription, Transcription regulationUniRule annotation

Keywords - Ligandi

DNA-bindingUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciCACI479433:GI6Z-3664-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Transcriptional regulator, LuxR familyImported
Gene namesi
Ordered Locus Names:Caci_3634Imported
OrganismiCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)Imported
Taxonomic identifieri479433 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaCatenulisporalesCatenulisporaceaeCatenulispora
ProteomesiUP000000851 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479433.Caci_3634.

Structurei

3D structure databases

ProteinModelPortaliC7QBR8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Contains 1 HTH luxR-type DNA-binding domain.UniRule annotation

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiEHIYAKT.
OrthoDBiEOG6G4VQG.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7QBR8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRVTLGAQGA RTSRVRLAEL LGMLSLATDL GLGQSMEHVL RQCLIALRLA
60 70 80 90 100
GRMGMDAAGR EVVYYTSLLA WVGCHVDAYE QAKWFGDDTA LKEDFRQTDF
110 120 130 140 150
ATAVSGPLFM LRHVGAGRGL PERVRIGAAF MTDGRRAGEA MLRNHWLAAD
160 170 180 190 200
HLAEQLGLGQ PVRDGIEQTF ERWDGNGVPK GASRQEILLA SRLVNLADVV
210 220 230 240 250
EFFHRTGGTQ AAVAVARERR GTQFDPAVVD AFVEDAAALF ADLDCVDCWE
260 270 280 290 300
AVVAAEPALS VQLTDAQFEA ALEAIADFTD VKSPFTLGHS RAVADLAGQA
310 320 330 340 350
ARVYGLDDAE STAVRRAGLV HDIGRLGVPN TIWDKAGPLT RAEVERIRLH
360 370 380 390 400
PYWTDRALAC SPALASLAAI AVQHHERLDG SGYPRGLSGG VLTPQGRILA
410 420 430 440 450
AADFYRARTE PRPHRPACTA AEAAAQLTAE AKAGRMDGDA VAAVLGAAGH
460 470 480 490 500
RATRRPAWPG GLTRREVQVL RLLARGLSNG EIAEQLVISR KTVSHHVEHI
510 520
YAKTGTANRA MAGLYAVRHG LMDDA
Length:525
Mass (Da):56,427
Last modified:October 13, 2009 - v1
Checksum:iA58136F0122FD200
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001700 Genomic DNA. Translation: ACU72537.1.
RefSeqiWP_015792266.1. NC_013131.1.

Genome annotation databases

EnsemblBacteriaiACU72537; ACU72537; Caci_3634.
KEGGicai:Caci_3634.
PATRICi21285888. VBICatAci36872_3694.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001700 Genomic DNA. Translation: ACU72537.1.
RefSeqiWP_015792266.1. NC_013131.1.

3D structure databases

ProteinModelPortaliC7QBR8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi479433.Caci_3634.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU72537; ACU72537; Caci_3634.
KEGGicai:Caci_3634.
PATRICi21285888. VBICatAci36872_3694.

Phylogenomic databases

eggNOGiCOG2771.
HOGENOMiHOG000268981.
OMAiEHIYAKT.
OrthoDBiEOG6G4VQG.

Enzyme and pathway databases

BioCyciCACI479433:GI6Z-3664-MONOMER.

Family and domain databases

Gene3Di1.10.10.10. 1 hit.
1.10.3210.10. 1 hit.
InterProiIPR003607. HD/PDEase_dom.
IPR006674. HD_domain.
IPR016032. Sig_transdc_resp-reg_C-effctor.
IPR000792. Tscrpt_reg_LuxR_C.
IPR011991. WHTH_DNA-bd_dom.
[Graphical view]
PfamiPF00196. GerE. 1 hit.
[Graphical view]
PRINTSiPR00038. HTHLUXR.
SMARTiSM00471. HDc. 1 hit.
SM00421. HTH_LUXR. 1 hit.
[Graphical view]
SUPFAMiSSF46894. SSF46894. 1 hit.
PROSITEiPS00622. HTH_LUXR_1. 1 hit.
PS50043. HTH_LUXR_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897Imported.

Entry informationi

Entry nameiC7QBR8_CATAD
AccessioniPrimary (citable) accession number: C7QBR8
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: July 22, 2015
This is version 46 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.