C7QBR8 (C7QBR8_CATAD) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Transcriptional regulator, LuxR family EMBL ACU72537.1

Gene names

Ordered Locus Names:

Caci_3634

Organism

Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) [Complete proteome] [HAMAP] EMBL ACU72537.1

Taxonomic identifier

479433 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Actinobacteria › Actinobacteria › Actinobacteridae › Actinomycetales › Catenulisporineae › Catenulisporaceae › Catenulispora › Catenulispora acidiphila

Protein attributes

Sequence length	525 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Sequence similarities

Contains 1 HTH luxR-type DNA-binding domain. RuleBase RU000707

Ontologies

Keywords
Biological process	Transcription Transcription regulation RuleBase RU000707
Ligand	DNA-binding SAAS SAAS016032 RuleBase RU000707
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	intracellular signal transduction Inferred from electronic annotation. Source: GOC transcription, DNA-dependent Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	metal ion binding Inferred from electronic annotation. Source: InterPro phosphorelay response regulator activity Inferred from electronic annotation. Source: InterPro phosphoric diester hydrolase activity Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding Inferred from electronic annotation. Source: InterPro sequence-specific DNA binding transcription factor activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7QBR8 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: A58136F0122FD200	FASTA	525	56,427
	10 20 30 40 50 60 MRVTLGAQGA RTSRVRLAEL LGMLSLATDL GLGQSMEHVL RQCLIALRLA GRMGMDAAGR 70 80 90 100 110 120 EVVYYTSLLA WVGCHVDAYE QAKWFGDDTA LKEDFRQTDF ATAVSGPLFM LRHVGAGRGL 130 140 150 160 170 180 PERVRIGAAF MTDGRRAGEA MLRNHWLAAD HLAEQLGLGQ PVRDGIEQTF ERWDGNGVPK 190 200 210 220 230 240 GASRQEILLA SRLVNLADVV EFFHRTGGTQ AAVAVARERR GTQFDPAVVD AFVEDAAALF 250 260 270 280 290 300 ADLDCVDCWE AVVAAEPALS VQLTDAQFEA ALEAIADFTD VKSPFTLGHS RAVADLAGQA 310 320 330 340 350 360 ARVYGLDDAE STAVRRAGLV HDIGRLGVPN TIWDKAGPLT RAEVERIRLH PYWTDRALAC 370 380 390 400 410 420 SPALASLAAI AVQHHERLDG SGYPRGLSGG VLTPQGRILA AADFYRARTE PRPHRPACTA 430 440 450 460 470 480 AEAAAQLTAE AKAGRMDGDA VAAVLGAAGH RATRRPAWPG GLTRREVQVL RLLARGLSNG 490 500 510 520 EIAEQLVISR KTVSHHVEHI YAKTGTANRA MAGLYAVRHG LMDDA

References

[1]

"Complete genome sequence of Catenulispora acidiphila type strain (ID 139908)." Copeland A., Lapidus A., Glavina Del Rio T., Nolan M., Lucas S., Chen F., Tice H., Cheng J.F., Bruce D., Goodwin L., Pitluck S., Mikhailova N., Pati A., Ivanov N., Mavromatis K., Chen A., Palaniappan K., Chai P. , Land M., Hauser L., Chang Y.J., Jeffries C.D., Chertkov O., Brettin T., Detter J.C., Han C., Ali Z., Tindall B.J., Goker M., Bristow J., Eisen J.A., Markowitz V., Hugenholtz P., Kyrpides N.C., Klenk H.P. Stand. Genomic Sci. 1:119-125(2009) Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001700 Genomic DNA. Translation: ACU72537.1.
RefSeq	YP_003114378.1. NC_013131.1.
3D structure databases
ModBase	Search...
Protein-protein interaction databases
STRING	479433.Caci_3634.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACU72537; ACU72537; Caci_3634.
GeneID	8334987.
KEGG	cai:Caci_3634.
PATRIC	21285888. VBICatAci36872_3694.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG2771.
HOGENOM	HOG000268981.
OMA	DLGCSSN.
ProtClustDB	CLSK688397.
Enzyme and pathway databases
BioCyc	CACI479433:GI6Z-3664-MONOMER.
Family and domain databases
Gene3D	1.10.10.10. 1 hit. 1.10.3210.10. 1 hit.
InterPro	IPR003607. HD/PDEase_dom. IPR006674. HD_domain. IPR016032. Sig_transdc_resp-reg_C-effctor. IPR000792. Tscrpt_reg_LuxR_C. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF00196. GerE. 1 hit. [Graphical view]
PRINTS	PR00038. HTHLUXR.
SMART	SM00471. HDc. 1 hit. SM00421. HTH_LUXR. 1 hit. [Graphical view]
SUPFAM	SSF46894. Bipartite_resp_reg_C-effector. 1 hit.
PROSITE	PS00622. HTH_LUXR_1. 1 hit. PS50043. HTH_LUXR_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

C7QBR8_CATAD

Accession

Primary (citable) accession number: C7QBR8

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 31 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)