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C7QB87 (C7QB87_CATAD) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 29. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length243 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity. HAMAP-Rule MF_00564 SAAS SAAS002381

Catalytic activity

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate. HAMAP-Rule MF_00564 SAAS SAAS002381

Sequence similarities

Belongs to the RNase PH family. HAMAP-Rule MF_00564

Sequences

Sequence LengthMass (Da)Tools
C7QB87 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: A26A632488200C36

FASTA24325,928
        10         20         30         40         50         60 
MSAARVDGRK VGQLRPVTLT RKWSIHPEGS VLVEFGQTKV LCTASVTEGV PRWLRGSGKG 

        70         80         90        100        110        120 
WVTAEYAMLP RATNTRGDRE SVKGKVGGRT QEISRLIGRA LRAVVDTKAL GENTIIVDCD 

       130        140        150        160        170        180 
VLQADGGTRT AAITGAYVAL QDAVTWMRDK KMIKASREPL AGSVSAVSVG IIDGVPMLDL 

       190        200        210        220        230        240 
CYEEDVRAET DMNVVCTADG KFVEVQGTAE GAPFDRAELD ALLDLAAAGC RELASHQVKA 


LLS 

« Hide

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001700 Genomic DNA. Translation: ACU76378.1.
RefSeqYP_003118219.1. NC_013131.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING479433.Caci_7553.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACU76378; ACU76378; Caci_7553.
GeneID8338924.
KEGGcai:Caci_7553.
PATRIC21293860. VBICatAci36872_7667.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG0689.
HOGENOMHOG000229516.
KOK00989.
OMAKGQGWVT.
OrthoDBEOG6CZQQP.
ProtClustDBPRK00173.

Enzyme and pathway databases

BioCycCACI479433:GI6Z-7599-MONOMER.

Family and domain databases

Gene3D3.30.230.70. 1 hit.
HAMAPMF_00564. RNase_PH.
InterProIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsTIGR01966. RNasePH. 1 hit.
PROSITEPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameC7QB87_CATAD
AccessionPrimary (citable) accession number: C7QB87
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 16, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)