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C7QB87

- C7QB87_CATAD

UniProt

C7QB87 - C7QB87_CATAD

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Protein
Ribonuclease PH
Gene
rph, Caci_7553
Organism
Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates By similarity.UniRule annotationSAAS annotations

Catalytic activityi

tRNA(n+1) + phosphate = tRNA(n) + a nucleoside diphosphate.UniRule annotationSAAS annotations

GO - Molecular functioni

  1. tRNA binding Source: InterPro
  2. tRNA nucleotidyltransferase activity Source: UniProtKB-EC
  3. tRNA-specific ribonuclease activity Source: InterPro

GO - Biological processi

  1. tRNA processing Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

NucleotidyltransferaseUniRule annotationSAAS annotationsImported, Transferase

Keywords - Biological processi

tRNA processingUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciCACI479433:GI6Z-7599-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Ribonuclease PHUniRule annotation (EC:2.7.7.56UniRule annotation)
Short name:
RNase PHUniRule annotation
Alternative name(s):
tRNA nucleotidyltransferase
Gene namesi
Name:rphUniRule annotation
Ordered Locus Names:Caci_7553Imported
OrganismiCatenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897)Imported
Taxonomic identifieri479433 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCatenulisporineaeCatenulisporaceaeCatenulispora
ProteomesiUP000000851: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi479433.Caci_7553.

Family & Domainsi

Sequence similaritiesi

Belongs to the RNase PH family.UniRule annotation

Phylogenomic databases

eggNOGiCOG0689.
HOGENOMiHOG000229516.
KOiK00989.
OMAiVEFGGTK.
OrthoDBiEOG6CZQQP.

Family and domain databases

Gene3Di3.30.230.70. 1 hit.
HAMAPiMF_00564. RNase_PH.
InterProiIPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view]
PfamiPF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view]
SUPFAMiSSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsiTIGR01966. RNasePH. 1 hit.
PROSITEiPS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7QB87-1 [UniParc]FASTAAdd to Basket

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MSAARVDGRK VGQLRPVTLT RKWSIHPEGS VLVEFGQTKV LCTASVTEGV    50
PRWLRGSGKG WVTAEYAMLP RATNTRGDRE SVKGKVGGRT QEISRLIGRA 100
LRAVVDTKAL GENTIIVDCD VLQADGGTRT AAITGAYVAL QDAVTWMRDK 150
KMIKASREPL AGSVSAVSVG IIDGVPMLDL CYEEDVRAET DMNVVCTADG 200
KFVEVQGTAE GAPFDRAELD ALLDLAAAGC RELASHQVKA LLS 243
Length:243
Mass (Da):25,928
Last modified:October 13, 2009 - v1
Checksum:iA26A632488200C36
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001700 Genomic DNA. Translation: ACU76378.1.
RefSeqiWP_015796103.1. NC_013131.1.
YP_003118219.1. NC_013131.1.

Genome annotation databases

EnsemblBacteriaiACU76378; ACU76378; Caci_7553.
GeneIDi8338924.
KEGGicai:Caci_7553.
PATRICi21293860. VBICatAci36872_7667.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001700 Genomic DNA. Translation: ACU76378.1 .
RefSeqi WP_015796103.1. NC_013131.1.
YP_003118219.1. NC_013131.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 479433.Caci_7553.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU76378 ; ACU76378 ; Caci_7553 .
GeneIDi 8338924.
KEGGi cai:Caci_7553.
PATRICi 21293860. VBICatAci36872_7667.

Phylogenomic databases

eggNOGi COG0689.
HOGENOMi HOG000229516.
KOi K00989.
OMAi VEFGGTK.
OrthoDBi EOG6CZQQP.

Enzyme and pathway databases

BioCyci CACI479433:GI6Z-7599-MONOMER.

Family and domain databases

Gene3Di 3.30.230.70. 1 hit.
HAMAPi MF_00564. RNase_PH.
InterProi IPR001247. ExoRNase_PH_dom1.
IPR015847. ExoRNase_PH_dom2.
IPR027408. PNPase/RNase_PH_dom.
IPR020568. Ribosomal_S5_D2-typ_fold.
IPR002381. RNase_PH_bac-type.
IPR018336. RNase_PH_CS.
[Graphical view ]
Pfami PF01138. RNase_PH. 1 hit.
PF03725. RNase_PH_C. 1 hit.
[Graphical view ]
SUPFAMi SSF54211. SSF54211. 1 hit.
SSF55666. SSF55666. 1 hit.
TIGRFAMsi TIGR01966. RNasePH. 1 hit.
PROSITEi PS01277. RIBONUCLEASE_PH. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897.

Entry informationi

Entry nameiC7QB87_CATAD
AccessioniPrimary (citable) accession number: C7QB87
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: September 3, 2014
This is version 31 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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