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C7PQ20

- C7PQ20_CHIPD

UniProt

C7PQ20 - C7PQ20_CHIPD

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Protein
Submitted name: ATP dependent DNA ligase
Gene
Cpin_6857
Organism
Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCPIN485918:GHYR-6953-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cpin_6857Imported
OrganismiChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)Imported
Taxonomic identifieri485918 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeChitinophaga
ProteomesiUP000002215: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485918.Cpin_6857.

Structurei

3D structure databases

ProteinModelPortaliC7PQ20.

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7PQ20-1 [UniParc]FASTAAdd to Basket

« Hide

MKEFATLIRI LSNSTKTNEK LDALSKYMAT ADAADRLWVL ALFTGRRPKR    50
TVNATQLSTW CLQMTGLPAW LYEECYHTVG DLAETIALLL PPGKSISVHP 100
LHYWIDQLIQ LEKADETTKQ TFILKAWEEL DTSERFVFNK LITGGFRIGV 150
SQKMMVNALA DTYDIPAATI SHMISGNWDP QKTTIEALLS ENITEADASK 200
PFPFYLAYAL ETGPAELGTP EQWQAEWKWD GIRGQIIKRN GQLFVWSRGE 250
ELITEKFPEY QPLLELLPEG TVLDGEILTF ADGFPLPFQT LQTRIGRKNV 300
TKKQLQEAPV AFLSYDLLEW EGQDIRTTAL QERRVLLEQL VEKINHPTLR 350
LSPAITFHDW EELAAFRLQA REKGSEGLML KKLDSAYQVG RKRGDWWKWK 400
IDPLTIDAVM IYAQKGHGRR SNLYTDYTFA VRDGEQLVSF TKAYSGLTDK 450
EINEVDNWVK RNSIEKFGPV RTVKPELVFE IGFEGIAASN RHKSGVALRF 500
PRILRWRKDK PVTEINTLTD LQQLLQMHKQ 530
Length:530
Mass (Da):60,764
Last modified:October 13, 2009 - v1
Checksum:iFF37D8FE554EA963
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001699 Genomic DNA. Translation: ACU64258.1.
RefSeqiYP_003126459.1. NC_013132.1.

Genome annotation databases

EnsemblBacteriaiACU64258; ACU64258; Cpin_6857.
GeneIDi8363049.
KEGGicpi:Cpin_6857.
PATRICi21362318. VBIChiPin99107_6761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP001699 Genomic DNA. Translation: ACU64258.1 .
RefSeqi YP_003126459.1. NC_013132.1.

3D structure databases

ProteinModelPortali C7PQ20.
ModBasei Search...

Protein-protein interaction databases

STRINGi 485918.Cpin_6857.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU64258 ; ACU64258 ; Cpin_6857 .
GeneIDi 8363049.
KEGGi cpi:Cpin_6857.
PATRICi 21362318. VBIChiPin99107_6761.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CPIN485918:GHYR-6953-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034.

Entry informationi

Entry nameiC7PQ20_CHIPD
AccessioniPrimary (citable) accession number: C7PQ20
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 34 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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