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C7PQ20

- C7PQ20_CHIPD

UniProt

C7PQ20 - C7PQ20_CHIPD

Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cpin_6857

Organism
Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 35 (01 Oct 2014)
      Sequence version 1 (13 Oct 2009)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciCPIN485918:GHYR-6953-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP dependent DNA ligaseImported
    Gene namesi
    Ordered Locus Names:Cpin_6857Imported
    OrganismiChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)Imported
    Taxonomic identifieri485918 [NCBI]
    Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeChitinophaga
    ProteomesiUP000002215: Chromosome

    Interactioni

    Protein-protein interaction databases

    STRINGi485918.Cpin_6857.

    Structurei

    3D structure databases

    ProteinModelPortaliC7PQ20.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    eggNOGiCOG1793.
    HOGENOMiHOG000036007.
    KOiK01971.
    OMAiNRHKSGV.
    OrthoDBiEOG6Q8HXT.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    C7PQ20-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKEFATLIRI LSNSTKTNEK LDALSKYMAT ADAADRLWVL ALFTGRRPKR    50
    TVNATQLSTW CLQMTGLPAW LYEECYHTVG DLAETIALLL PPGKSISVHP 100
    LHYWIDQLIQ LEKADETTKQ TFILKAWEEL DTSERFVFNK LITGGFRIGV 150
    SQKMMVNALA DTYDIPAATI SHMISGNWDP QKTTIEALLS ENITEADASK 200
    PFPFYLAYAL ETGPAELGTP EQWQAEWKWD GIRGQIIKRN GQLFVWSRGE 250
    ELITEKFPEY QPLLELLPEG TVLDGEILTF ADGFPLPFQT LQTRIGRKNV 300
    TKKQLQEAPV AFLSYDLLEW EGQDIRTTAL QERRVLLEQL VEKINHPTLR 350
    LSPAITFHDW EELAAFRLQA REKGSEGLML KKLDSAYQVG RKRGDWWKWK 400
    IDPLTIDAVM IYAQKGHGRR SNLYTDYTFA VRDGEQLVSF TKAYSGLTDK 450
    EINEVDNWVK RNSIEKFGPV RTVKPELVFE IGFEGIAASN RHKSGVALRF 500
    PRILRWRKDK PVTEINTLTD LQQLLQMHKQ 530
    Length:530
    Mass (Da):60,764
    Last modified:October 13, 2009 - v1
    Checksum:iFF37D8FE554EA963
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001699 Genomic DNA. Translation: ACU64258.1.
    RefSeqiYP_003126459.1. NC_013132.1.

    Genome annotation databases

    EnsemblBacteriaiACU64258; ACU64258; Cpin_6857.
    GeneIDi8363049.
    KEGGicpi:Cpin_6857.
    PATRICi21362318. VBIChiPin99107_6761.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP001699 Genomic DNA. Translation: ACU64258.1 .
    RefSeqi YP_003126459.1. NC_013132.1.

    3D structure databases

    ProteinModelPortali C7PQ20.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 485918.Cpin_6857.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai ACU64258 ; ACU64258 ; Cpin_6857 .
    GeneIDi 8363049.
    KEGGi cpi:Cpin_6857.
    PATRICi 21362318. VBIChiPin99107_6761.

    Phylogenomic databases

    eggNOGi COG1793.
    HOGENOMi HOG000036007.
    KOi K01971.
    OMAi NRHKSGV.
    OrthoDBi EOG6Q8HXT.

    Enzyme and pathway databases

    BioCyci CPIN485918:GHYR-6953-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF117018. SSF117018. 1 hit.
    SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034Imported.

    Entry informationi

    Entry nameiC7PQ20_CHIPD
    AccessioniPrimary (citable) accession number: C7PQ20
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 13, 2009
    Last sequence update: October 13, 2009
    Last modified: October 1, 2014
    This is version 35 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3