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C7PQ20

- C7PQ20_CHIPD

UniProt

C7PQ20 - C7PQ20_CHIPD

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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Cpin_6857

Organism
Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciCPIN485918:GHYR-6953-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Cpin_6857Imported
OrganismiChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)Imported
Taxonomic identifieri485918 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeChitinophaga
ProteomesiUP000002215: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485918.Cpin_6857.

Structurei

3D structure databases

ProteinModelPortaliC7PQ20.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG1793.
HOGENOMiHOG000036007.
KOiK01971.
OMAiNRHKSGV.
OrthoDBiEOG6Q8HXT.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

C7PQ20-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKEFATLIRI LSNSTKTNEK LDALSKYMAT ADAADRLWVL ALFTGRRPKR
60 70 80 90 100
TVNATQLSTW CLQMTGLPAW LYEECYHTVG DLAETIALLL PPGKSISVHP
110 120 130 140 150
LHYWIDQLIQ LEKADETTKQ TFILKAWEEL DTSERFVFNK LITGGFRIGV
160 170 180 190 200
SQKMMVNALA DTYDIPAATI SHMISGNWDP QKTTIEALLS ENITEADASK
210 220 230 240 250
PFPFYLAYAL ETGPAELGTP EQWQAEWKWD GIRGQIIKRN GQLFVWSRGE
260 270 280 290 300
ELITEKFPEY QPLLELLPEG TVLDGEILTF ADGFPLPFQT LQTRIGRKNV
310 320 330 340 350
TKKQLQEAPV AFLSYDLLEW EGQDIRTTAL QERRVLLEQL VEKINHPTLR
360 370 380 390 400
LSPAITFHDW EELAAFRLQA REKGSEGLML KKLDSAYQVG RKRGDWWKWK
410 420 430 440 450
IDPLTIDAVM IYAQKGHGRR SNLYTDYTFA VRDGEQLVSF TKAYSGLTDK
460 470 480 490 500
EINEVDNWVK RNSIEKFGPV RTVKPELVFE IGFEGIAASN RHKSGVALRF
510 520 530
PRILRWRKDK PVTEINTLTD LQQLLQMHKQ
Length:530
Mass (Da):60,764
Last modified:October 13, 2009 - v1
Checksum:iFF37D8FE554EA963
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001699 Genomic DNA. Translation: ACU64258.1.
RefSeqiYP_003126459.1. NC_013132.1.

Genome annotation databases

EnsemblBacteriaiACU64258; ACU64258; Cpin_6857.
GeneIDi8363049.
KEGGicpi:Cpin_6857.
PATRICi21362318. VBIChiPin99107_6761.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001699 Genomic DNA. Translation: ACU64258.1 .
RefSeqi YP_003126459.1. NC_013132.1.

3D structure databases

ProteinModelPortali C7PQ20.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 485918.Cpin_6857.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai ACU64258 ; ACU64258 ; Cpin_6857 .
GeneIDi 8363049.
KEGGi cpi:Cpin_6857.
PATRICi 21362318. VBIChiPin99107_6761.

Phylogenomic databases

eggNOGi COG1793.
HOGENOMi HOG000036007.
KOi K01971.
OMAi NRHKSGV.
OrthoDBi EOG6Q8HXT.

Enzyme and pathway databases

BioCyci CPIN485918:GHYR-6953-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034Imported.

Entry informationi

Entry nameiC7PQ20_CHIPD
AccessioniPrimary (citable) accession number: C7PQ20
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: October 1, 2014
This is version 35 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3