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Protein
Submitted name:

Alpha amylase catalytic region

Gene

Cpin_2176

Organism
Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei229 – 2291NucleophileUniRule annotation
Active sitei259 – 2591Proton donorUniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciCPIN485918:GHYR-2231-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylase catalytic regionImported
Gene namesi
Ordered Locus Names:Cpin_2176Imported
OrganismiChitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034)Imported
Taxonomic identifieri485918 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesSphingobacteriiaSphingobacterialesChitinophagaceaeChitinophaga
ProteomesiUP000002215 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi485918.Cpin_2176.

Structurei

3D structure databases

ProteinModelPortaliC7PDT9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

C7PDT9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMQYFHWYTP EDGSLWNTVK KEAPKLAALG INAIWLPPAY KGADGASSRG
60 70 80 90 100
YDVYDLYDLG EFDQKGTVRT RYGTREEFEA AVKAIQESGM QVYVDVVANH
110 120 130 140 150
LMGGDETEKV TVRKVDAENR NEFISEPMEV EAYTRFTYPG RKGAHSDFVW
160 170 180 190 200
DHQCFTGIDH VSNSDEEGIF TIQNEYGEGW EEVIDTEKGN YDYLMGADIE
210 220 230 240 250
FRNPAVREEF RRWGEWYYNA VKFDGFRLDA VKHITPSFFN EWLDQMRQYT
260 270 280 290 300
GRELFAVGEY WAPGQLDLLL KYIEATEGKM SLFDASLHHN FYDASLKGKD
310 320 330 340 350
YDLTTIFDGS LVQAKPFLAV TVIGNHDTQP LQALEAPVDY WFKPIAYALI
360 370 380 390 400
LLREHGYPCV FYPDLYGAKY TDKNGEGEDT EIELVPVEGL ELLIPARDQH
410 420 430 440 450
AYGVQRDYFD HANCIGWTRE GDEEHTGCAV VISNGEEGNK HMEIGKRYAG
460 470 480
KRFKDILGKR QEEIVVDEEG WAEFLCAAGS VSVWTLAE
Length:488
Mass (Da):55,782
Last modified:October 13, 2009 - v1
Checksum:i3EBB23D61F270AF1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001699 Genomic DNA. Translation: ACU59668.1.
RefSeqiWP_012789844.1. NC_013132.1.
YP_003121869.1. NC_013132.1.

Genome annotation databases

EnsemblBacteriaiACU59668; ACU59668; Cpin_2176.
KEGGicpi:Cpin_2176.
PATRICi21353053. VBIChiPin99107_2169.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001699 Genomic DNA. Translation: ACU59668.1.
RefSeqiWP_012789844.1. NC_013132.1.
YP_003121869.1. NC_013132.1.

3D structure databases

ProteinModelPortaliC7PDT9.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi485918.Cpin_2176.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACU59668; ACU59668; Cpin_2176.
KEGGicpi:Cpin_2176.
PATRICi21353053. VBIChiPin99107_2169.

Phylogenomic databases

eggNOGiCOG0366.
HOGENOMiHOG000094847.
KOiK01176.
OMAiFFHWYYP.
OrthoDBiEOG65QWH3.

Enzyme and pathway databases

BioCyciCPIN485918:GHYR-2231-MONOMER.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034Imported.

Entry informationi

Entry nameiC7PDT9_CHIPD
AccessioniPrimary (citable) accession number: C7PDT9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 27, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.