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Protein
Submitted name:

ATP dependent DNA ligase

Gene

Mefer_1305

Organism
Methanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86) (Methanococcus fervens)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciMFER573064:G1GFN-1341-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Mefer_1305Imported
OrganismiMethanocaldococcus fervens (strain DSM 4213 / JCM 15782 / AG86) (Methanococcus fervens)Imported
Taxonomic identifieri573064 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
Proteomesi

Interactioni

Protein-protein interaction databases

STRINGi573064.Mefer_1305

Structurei

3D structure databases

ProteinModelPortaliC7P982
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini89 – 241RNA_ligaseInterPro annotationAdd BLAST153

Phylogenomic databases

eggNOGiarCOG04218 Archaea
COG1423 LUCA
HOGENOMiHOG000224394
KOiK07468
OMAiEEKMNGY
OrthoDBiPOG093Z048P

Family and domain databases

CDDicd07894 Adenylation_RNA_ligase, 1 hit
InterProiView protein in InterPro
IPR021122 RNA_ligase_dom_REL/Rnl2
IPR001072 RNA_ligase_Pab1020
PfamiView protein in Pfam
PF09414 RNA_ligase, 1 hit
PRINTSiPR01048 Y414FAMILY
TIGRFAMsiTIGR01209 TIGR01209, 1 hit

Sequencei

Sequence statusi: Complete.

C7P982-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQVSAYALDK IAEKLNLSIK DLNKAFKKKI LREDEYKEQK YLLFKKGFRG
60 70 80 90 100
IEKGTVIFLN ENLDVVRGYP KTYRAITLYP TIKNHFIDKV VVEEKLNGYN
110 120 130 140 150
IRIVKVDDEI YALTRSGYIC PFTTKKVKKF LNLEILDDYN EYMLCGEMIG
160 170 180 190 200
LNNPYTPYYY KEADKGYENL GFYIFDIKER ETNKSLPVKE RMKLCEKYNL
210 220 230 240 250
PYVKPLAIVD KETAHIQVRK IIEKLNKEGR EGVVLKDPDM AVSPIKYTTH
260 270 280 290 300
YTQCEDLKSA FTFFFDLGID FIFSRVVREG FMSYEFKESL EERKIRAKDL
310 320 330 340 350
GEAILLPMVE TINKVANGER VSEDFELIFD SEEDFEEFLY FMRKMKMIIN
360 370 380 390
IKNVEEINTN EGVKIKALIG KIYNRTNDKI ISYLNGTLWE
Length:390
Mass (Da):45,910
Last modified:October 13, 2009 - v1
Checksum:i0BE3D03979C93838
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001696 Genomic DNA Translation: ACV25114.1
RefSeqiWP_015791848.1, NC_013156.1

Genome annotation databases

EnsemblBacteriaiACV25114; ACV25114; Mefer_1305
GeneIDi8366008
KEGGimfe:Mefer_1305

Similar proteinsi

Entry informationi

Entry nameiC7P982_METFA
AccessioniPrimary (citable) accession number: C7P982
Entry historyiIntegrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: March 28, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

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