C7P982 (C7P982_METFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
ATP dependent DNA ligase EMBL ACV25114.1

Gene names

Ordered Locus Names:

Mefer_1305 EMBL ACV25114.1

Organism

Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) (Methanococcus fervens) [Complete proteome] [HAMAP] EMBL ACV25114.1

Taxonomic identifier

573064 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus › Methanocaldococcus fervens

Protein attributes

Sequence length	390 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Molecular function	Ligase EMBL ACV25114.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	DNA recombination Inferred from electronic annotation. Source: InterPro DNA repair Inferred from electronic annotation. Source: InterPro
Molecular_function	ATP binding Inferred from electronic annotation. Source: InterPro DNA ligase (ATP) activity Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7P982 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 0BE3D03979C93838	FASTA	390	45,910
	10 20 30 40 50 60 MQVSAYALDK IAEKLNLSIK DLNKAFKKKI LREDEYKEQK YLLFKKGFRG IEKGTVIFLN 70 80 90 100 110 120 ENLDVVRGYP KTYRAITLYP TIKNHFIDKV VVEEKLNGYN IRIVKVDDEI YALTRSGYIC 130 140 150 160 170 180 PFTTKKVKKF LNLEILDDYN EYMLCGEMIG LNNPYTPYYY KEADKGYENL GFYIFDIKER 190 200 210 220 230 240 ETNKSLPVKE RMKLCEKYNL PYVKPLAIVD KETAHIQVRK IIEKLNKEGR EGVVLKDPDM 250 260 270 280 290 300 AVSPIKYTTH YTQCEDLKSA FTFFFDLGID FIFSRVVREG FMSYEFKESL EERKIRAKDL 310 320 330 340 350 360 GEAILLPMVE TINKVANGER VSEDFELIFD SEEDFEEFLY FMRKMKMIIN IKNVEEINTN 370 380 390 EGVKIKALIG KIYNRTNDKI ISYLNGTLWE

References

[1]

"Complete sequence of chromosome of Methanocaldococcus fervens AG86." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lupa-Sieprawska M., Whitman W.B. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 4213 / JCM 157852 / AG86.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001696 Genomic DNA. Translation: ACV25114.1.
RefSeq	YP_003128614.1. NC_013156.1.
3D structure databases
ProteinModelPortal	C7P982.
ModBase	Search...
Protein-protein interaction databases
STRING	573064.Mefer_1305.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV25114; ACV25114; Mefer_1305.
GeneID	8366008.
KEGG	mfe:Mefer_1305.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG1423.
HOGENOM	HOG000224394.
KO	K07468.
OMA	EEKMNGY.
ProtClustDB	CLSK862643.
Enzyme and pathway databases
BioCyc	MFER573064:GHUI-1381-MONOMER.
Family and domain databases
InterPro	IPR012310. DNA_ligase_ATP-dep_cent. IPR001072. Uncharacterised_MJ0414. [Graphical view]
Pfam	PF01068. DNA_ligase_A_M. 1 hit. [Graphical view]
PRINTS	PR01048. Y414FAMILY.
TIGRFAMs	TIGR01209. TIGR01209. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7P982_METFA

Accession

Primary (citable) accession number: C7P982

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 22 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)