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C7P982 (C7P982_METFA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length390 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL ACV25114.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C7P982 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 0BE3D03979C93838

FASTA39045,910
        10         20         30         40         50         60 
MQVSAYALDK IAEKLNLSIK DLNKAFKKKI LREDEYKEQK YLLFKKGFRG IEKGTVIFLN 

        70         80         90        100        110        120 
ENLDVVRGYP KTYRAITLYP TIKNHFIDKV VVEEKLNGYN IRIVKVDDEI YALTRSGYIC 

       130        140        150        160        170        180 
PFTTKKVKKF LNLEILDDYN EYMLCGEMIG LNNPYTPYYY KEADKGYENL GFYIFDIKER 

       190        200        210        220        230        240 
ETNKSLPVKE RMKLCEKYNL PYVKPLAIVD KETAHIQVRK IIEKLNKEGR EGVVLKDPDM 

       250        260        270        280        290        300 
AVSPIKYTTH YTQCEDLKSA FTFFFDLGID FIFSRVVREG FMSYEFKESL EERKIRAKDL 

       310        320        330        340        350        360 
GEAILLPMVE TINKVANGER VSEDFELIFD SEEDFEEFLY FMRKMKMIIN IKNVEEINTN 

       370        380        390 
EGVKIKALIG KIYNRTNDKI ISYLNGTLWE 

« Hide

References

[1]"Complete sequence of chromosome of Methanocaldococcus fervens AG86."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lupa-Sieprawska M., Whitman W.B.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 4213 / JCM 157852 / AG86.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001696 Genomic DNA. Translation: ACV25114.1.
RefSeqYP_003128614.1. NC_013156.1.

3D structure databases

ProteinModelPortalC7P982.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING573064.Mefer_1305.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV25114; ACV25114; Mefer_1305.
GeneID8366008.
KEGGmfe:Mefer_1305.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1423.
HOGENOMHOG000224394.
KOK07468.
OMAEEKMNGY.
ProtClustDBCLSK862643.

Enzyme and pathway databases

BioCycMFER573064:GHUI-1347-MONOMER.

Family and domain databases

InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR001072. Uncharacterised_MJ0414.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
PRINTSPR01048. Y414FAMILY.
TIGRFAMsTIGR01209. TIGR01209. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7P982_METFA
AccessionPrimary (citable) accession number: C7P982
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 16, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)