C7P5E3 (C7P5E3_METFA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribose-5-phosphate isomerase A HAMAP-Rule MF_00170
EC=5.3.1.6 HAMAP-Rule MF_00170

Alternative name(s):
Phosphoriboisomerase A HAMAP-Rule MF_00170

Gene names

Name:	rpiA HAMAP-Rule MF_00170
Ordered Locus Names:	Mefer_1518 EMBL ACV25321.1

Organism

Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) (Methanococcus fervens) [Complete proteome] [HAMAP] EMBL ACV25321.1

Taxonomic identifier

573064 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Euryarchaeota › Methanococci › Methanococcales › Methanocaldococcaceae › Methanocaldococcus › Methanocaldococcus fervens

Protein attributes

Sequence length	226 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	D-ribose 5-phosphate = D-ribulose 5-phosphate. HAMAP-Rule MF_00170
Pathway	Carbohydrate degradation; pentose phosphate pathway; D-ribose 5-phosphate from D-ribulose 5-phosphate (non-oxidative stage): step 1/1. HAMAP-Rule MF_00170
Sequence similarities	Belongs to the ribose 5-phosphate isomerase family. HAMAP-Rule MF_00170

Ontologies

Keywords
Molecular function	Isomerase HAMAP-Rule MF_00170 EMBL ACV25321.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	pentose-phosphate shunt, non-oxidative branch Inferred from electronic annotation. Source: HAMAP
Molecular_function	ribose-5-phosphate isomerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	C7P5E3 [UniParc]. Last modified October 13, 2009. Version 1. Checksum: 57F870173ABCE4AB	FASTA	226	24,643
	10 20 30 40 50 60 MSNEDLKLKV AKEAVKLVKD GMVVGLGTGS TAALFIRELG NRIQGEELTV FGIPTSFEAK 70 80 90 100 110 120 MLAMQYGIPL VSLDEYDVDI AFDGADEVEE KTLFLIKGGG GCHTQEKIVD YNANEFVVLV 130 140 150 160 170 180 DESKLVKNLG EKFPIPVEVI PSAYRVVIRA LSEMGGEAVI RLGERKRGPV ITDNGNMIID 190 200 210 220 VFMKVDDAVE LEKEINNIPG VVENGIFTKV DKVLVGTKKG VKTLKK

References

[1]

"Complete sequence of chromosome of Methanocaldococcus fervens AG86." US DOE Joint Genome Institute Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lupa-Sieprawska M., Whitman W.B. Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 4213 / JCM 157852 / AG86.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP001696 Genomic DNA. Translation: ACV25321.1.
RefSeq	YP_003128821.1. NC_013156.1.
3D structure databases
ProteinModelPortal	C7P5E3.
ModBase	Search...
Protein-protein interaction databases
STRING	573064.Mefer_1518.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	ACV25321; ACV25321; Mefer_1518.
GeneID	8366224.
KEGG	mfe:Mefer_1518.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0120.
HOGENOM	HOG000276369.
KO	K01807.
OMA	STTAYFI.
ProtClustDB	PRK00702.
Enzyme and pathway databases
BioCyc	MFER573064:GHUI-1597-MONOMER.
UniPathway	UPA00115; UER00412.
Family and domain databases
HAMAP	MF_00170. Rib_5P_isom_A.
InterPro	IPR004788. Ribose5P_isomerase_typA. IPR020672. Ribose5P_isomerase_typA_subgr. [Graphical view]
PANTHER	PTHR11934. PTHR11934. 1 hit.
Pfam	PF06026. Rib_5-P_isom_A. 1 hit. [Graphical view]
TIGRFAMs	TIGR00021. rpiA. 1 hit.
ProtoNet	Search...

Entry information

Entry name

C7P5E3_METFA

Accession

Primary (citable) accession number: C7P5E3

Entry history

Integrated into UniProtKB/TrEMBL:	October 13, 2009
Last sequence update:	October 13, 2009
Last modified:	May 1, 2013
This is version 28 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)