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Protein
Submitted name:

Alpha-amylase

Gene

Mefer_1511

Organism
Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) (Methanococcus fervens)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Enzyme and pathway databases

BioCyciMFER573064:GHUI-1556-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
Ordered Locus Names:Mefer_1511Imported
OrganismiMethanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) (Methanococcus fervens)Imported
Taxonomic identifieri573064 [NCBI]
Taxonomic lineageiArchaeaEuryarchaeotaMethanococciMethanococcalesMethanocaldococcaceaeMethanocaldococcus
ProteomesiUP000001495 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi573064.Mefer_1511.

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 57 family.UniRule annotation

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.

Sequencei

Sequence statusi: Complete.

C7P5D6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLITFNFEVH QPHRSNKDVN KKGNSLWEKY VDTKLNKEVF NKVAEKCYIP
60 70 80 90 100
TNELILELID EYDFKVNYSI TGVFIEQALE FNEYVLDLFK DLVKTGNVEL
110 120 130 140 150
IAETYHHSLS SLFESEEEFI EDIEMHRNLY KEIFGFKADV FRNTELIYNN
160 170 180 190 200
RIARIARDLG FKAIFTEGTE KILGWRSPNY LYHSPDGMKI LLRNYRLSDD
210 220 230 240 250
IGFRFSSRDW DQYPLTADKY AIWLASTPGE VINIYMDYET FGEHHWKECG
260 270 280 290 300
IFEFLRYLPV EIAKHEHLEV VNVSEAVERL EPRGEIYVHE FATISWADSE
310 320 330 340 350
RDVSAWLGNK MQRISFEKLK DIGEFIKENE NKLKKLGKFD EIYKMYKILQ
360 370 380 390 400
TSDNFYYQCT KGFGDMDVHN YFSHFDTPFD AYASYLNILY DFEYYIKELL
410 420 430 440 450
NKFEISGDKD GDFKLKRQQK TIKNEKEKDT KNKVEKNPVE SDILIAKNDI
460 470
KDTENIYSQN KKGDKDKEGF IIT
Length:473
Mass (Da):56,104
Last modified:October 13, 2009 - v1
Checksum:i39942D965518F724
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001696 Genomic DNA. Translation: ACV25314.1.
RefSeqiWP_015792047.1. NC_013156.1.
YP_003128814.1. NC_013156.1.

Genome annotation databases

EnsemblBacteriaiACV25314; ACV25314; Mefer_1511.
GeneIDi8366217.
KEGGimfe:Mefer_1511.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP001696 Genomic DNA. Translation: ACV25314.1.
RefSeqiWP_015792047.1. NC_013156.1.
YP_003128814.1. NC_013156.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi573064.Mefer_1511.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiACV25314; ACV25314; Mefer_1511.
GeneIDi8366217.
KEGGimfe:Mefer_1511.

Phylogenomic databases

eggNOGiCOG1449.
HOGENOMiHOG000224113.
KOiK07405.
OMAiSDHFYYM.

Enzyme and pathway databases

BioCyciMFER573064:GHUI-1556-MONOMER.

Family and domain databases

Gene3Di3.20.110.10. 1 hit.
InterProiIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamiPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMiSSF88713. SSF88713. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete sequence of chromosome of Methanocaldococcus fervens AG86."
    US DOE Joint Genome Institute
    Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lupa-Sieprawska M., Whitman W.B.
    Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: DSM 4213 / JCM 157852 / AG86Imported.

Entry informationi

Entry nameiC7P5D6_METFA
AccessioniPrimary (citable) accession number: C7P5D6
Entry historyi
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: April 29, 2015
This is version 28 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.