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C7P5D6 (C7P5D6_METFA) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length473 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL ACV25314.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
C7P5D6 [UniParc].

Last modified October 13, 2009. Version 1.
Checksum: 39942D965518F724

FASTA47356,104
        10         20         30         40         50         60 
MLITFNFEVH QPHRSNKDVN KKGNSLWEKY VDTKLNKEVF NKVAEKCYIP TNELILELID 

        70         80         90        100        110        120 
EYDFKVNYSI TGVFIEQALE FNEYVLDLFK DLVKTGNVEL IAETYHHSLS SLFESEEEFI 

       130        140        150        160        170        180 
EDIEMHRNLY KEIFGFKADV FRNTELIYNN RIARIARDLG FKAIFTEGTE KILGWRSPNY 

       190        200        210        220        230        240 
LYHSPDGMKI LLRNYRLSDD IGFRFSSRDW DQYPLTADKY AIWLASTPGE VINIYMDYET 

       250        260        270        280        290        300 
FGEHHWKECG IFEFLRYLPV EIAKHEHLEV VNVSEAVERL EPRGEIYVHE FATISWADSE 

       310        320        330        340        350        360 
RDVSAWLGNK MQRISFEKLK DIGEFIKENE NKLKKLGKFD EIYKMYKILQ TSDNFYYQCT 

       370        380        390        400        410        420 
KGFGDMDVHN YFSHFDTPFD AYASYLNILY DFEYYIKELL NKFEISGDKD GDFKLKRQQK 

       430        440        450        460        470 
TIKNEKEKDT KNKVEKNPVE SDILIAKNDI KDTENIYSQN KKGDKDKEGF IIT 

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References

[1]"Complete sequence of chromosome of Methanocaldococcus fervens AG86."
US DOE Joint Genome Institute
Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Tice H., Bruce D., Goodwin L., Pitluck S., Chertkov O., Detter J.C., Han C., Tapia R., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G., Lupa-Sieprawska M., Whitman W.B.
Submitted (AUG-2009) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 4213 / JCM 157852 / AG86.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP001696 Genomic DNA. Translation: ACV25314.1.
RefSeqYP_003128814.1. NC_013156.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING573064.Mefer_1511.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaACV25314; ACV25314; Mefer_1511.
GeneID8366217.
KEGGmfe:Mefer_1511.

Organism-specific databases

CMRSearch...

Phylogenomic databases

eggNOGCOG1449.
HOGENOMHOG000224113.
KOK07405.
OMAFEVHQPY.

Enzyme and pathway databases

BioCycMFER573064:GHUI-1556-MONOMER.

Family and domain databases

Gene3D3.20.110.10. 1 hit.
InterProIPR011330. Glyco_hydro/deAcase_b/a-brl.
IPR027291. Glyco_hydro_38/57_N.
IPR004300. Glyco_hydro_57_N.
[Graphical view]
PfamPF03065. Glyco_hydro_57. 1 hit.
[Graphical view]
SUPFAMSSF88713. SSF88713. 1 hit.
ProtoNetSearch...

Entry information

Entry nameC7P5D6_METFA
AccessionPrimary (citable) accession number: C7P5D6
Entry history
Integrated into UniProtKB/TrEMBL: October 13, 2009
Last sequence update: October 13, 2009
Last modified: May 14, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)